48 complex(es)
PDB ID
Protein Name
Organism
Uniprot ID/ACC
Ligand Name
HET ID
Structure
PS-Score (Pocket Similarity)
Card
1 5D6Y Lysine-specific demethylase 4A Homo sapiens O75164 (KDM4A_HUMAN) N-TRIMETHYLLYSINE M3L 0.84 SHOW
2 2GFA Lysine-specific demethylase 4A Homo sapiens O75164 (KDM4A_HUMAN) N-TRIMETHYLLYSINE M3L 0.69 SHOW
3 4BD3 PHD finger protein 19 Homo sapiens Q5T6S3 (PHF19_HUMAN) N-TRIMETHYLLYSINE M3L 0.63 SHOW
4 6WAU PHD finger protein 19 Homo sapiens Q5T6S3 (PHF19_HUMAN) N-TRIMETHYLLYSINE M3L 0.62 SHOW
5 6WAV PHD finger protein 19 Homo sapiens Q5T6S3 (PHF19_HUMAN) N-TRIMETHYLLYSINE M3L 0.61 SHOW
6 4HCZ PHD finger protein 1 Homo sapiens O43189 (PHF1_HUMAN) N-TRIMETHYLLYSINE M3L 0.61 SHOW
7 5XFQ PHD finger protein 1 Mus musculus Q9Z1B8 (PHF1_MOUSE) N-TRIMETHYLLYSINE M3L 0.6 SHOW
8 6MXX TP53-binding protein 1 Homo sapiens Q12888 (TP53B_HUMAN) N-[3-(tert-butylamino)propyl]-3-iodobenzamide K6P 0.56 SHOW
9 6MXZ TP53-binding protein 1 Homo sapiens Q12888 (TP53B_HUMAN) N-[3-(tert-butylamino)propyl]-3-(propan-2-yl)benzamide K6S 0.56 SHOW
10 5XFR Metal-response element-binding transcription factor 2 Homo sapiens Q9Y483 (MTF2_HUMAN) N-TRIMETHYLLYSINE M3L 0.55 SHOW
11 5CIU DNA (cytosine-5)-methyltransferase 3B Homo sapiens Q9UBC3 (DNM3B_HUMAN) N-TRIMETHYLLYSINE M3L 0.54 SHOW
12 2X4W Peregrin Homo sapiens P55201 (BRPF1_HUMAN) N-TRIMETHYLLYSINE M3L 0.53 SHOW
13 6BHD Histone-lysine N-methyltransferase SETDB1 Homo sapiens Q15047 (SETB1_HUMAN) N-DIMETHYL-LYSINE MLY 0.52 SHOW
14 6IIT Hepatoma-derived growth factor-related protein 3 Homo sapiens Q9Y3E1 (HDGR3_HUMAN) N-DIMETHYL-LYSINE MLY 0.5 SHOW
15 5NRV DNA (cytosine-5)-methyltransferase 3B Homo sapiens Q9UBC3 (DNM3B_HUMAN) 6-dipropylamino-1-hexanol 96K 0.5 SHOW
16 2X4Y Peregrin Homo sapiens P55201 (BRPF1_HUMAN) N-TRIMETHYLLYSINE M3L 0.5 SHOW
17 6G2F Histone-lysine N-methyltransferase NSD3 Homo sapiens Q9BZ95 (NSD3_HUMAN) 4-[5-(7-fluoranylquinolin-4-yl)-1-methyl-imidazol-4-yl]-3,5-dimethyl-1,2-oxazole EHW 0.5 SHOW
18 3QJ6 Hepatoma-derived growth factor-related protein 2 Homo sapiens Q7Z4V5 (HDGR2_HUMAN) N-TRIMETHYLLYSINE M3L 0.5 SHOW
19 6WAT PHD finger protein 1 Homo sapiens O43189 (PHF1_HUMAN) N-TRIMETHYLLYSINE M3L 0.49 SHOW
20 3MO8 Peregrin Homo sapiens P55201 (BRPF1_HUMAN) N-TRIMETHYLLYSINE M3L 0.49 SHOW
21 6IIS Hepatoma-derived growth factor-related protein 3 Homo sapiens Q9Y3E1 (HDGR3_HUMAN) N-TRIMETHYLLYSINE M3L 0.49 SHOW
22 3QBY Hepatoma-derived growth factor-related protein 2 Homo sapiens Q7Z4V5 (HDGR2_HUMAN) N-TRIMETHYLLYSINE M3L 0.48 SHOW
23 2X4X Peregrin Homo sapiens P55201 (BRPF1_HUMAN) N-TRIMETHYLLYSINE M3L 0.48 SHOW
24 6G27 Histone-lysine N-methyltransferase NSD3 Homo sapiens Q9BZ95 (NSD3_HUMAN) 5-methyl-6-phenyl-2-piperidin-4-yl-pyridazin-3-one EHE 0.48 SHOW
25 6KCU JIL-1 anchoring and stabilizing protein, isoform A Drosophila melanogaster Q9VAA9 (Q9VAA9_DROME) 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL BTB 0.47 SHOW
26 6G25 Histone-lysine N-methyltransferase NSD3 Homo sapiens Q9BZ95 (NSD3_HUMAN) 3,5-dimethyl-4-(4-pyridin-4-yl-1~{H}-pyrazol-3-yl)-1,2-oxazole EHQ 0.47 SHOW
27 2M0O PHD finger protein 1 Homo sapiens O43189 (PHF1_HUMAN) N-TRIMETHYLLYSINE M3L 0.47 SHOW
28 6BHE Histone-lysine N-methyltransferase SETDB1 Homo sapiens Q15047 (SETB1_HUMAN) N-TRIMETHYLLYSINE M3L 0.47 SHOW
29 4N4H Zinc finger MYND domain-containing protein 11 Mus musculus Q8R5C8 (ZMY11_MOUSE) N-TRIMETHYLLYSINE M3L 0.46 SHOW
30 5Z8L Chromatin remodeling protein EBS Arabidopsis thaliana F4JL28 (EBS_ARATH) N-TRIMETHYLLYSINE M3L 0.46 SHOW
31 6UPT TP53-binding protein 1 Homo sapiens Q12888 (TP53B_HUMAN) 2-((2-chlorobenzyl)thio)-4,5-dihydro-1H-imidazole QFM 0.45 SHOW
32 6G2C Histone-lysine N-methyltransferase NSD3 Homo sapiens Q9BZ95 (NSD3_HUMAN) 3,5-dimethyl-4-(1-methyl-5-pyridin-4-yl-imidazol-4-yl)-1,2-oxazole EHT 0.45 SHOW
33 6G2E Histone-lysine N-methyltransferase NSD3 Homo sapiens Q9BZ95 (NSD3_HUMAN) [3,5-dimethyl-4-(1-methyl-5-pyridin-4-yl-imidazol-4-yl)phenyl]methanamine EHH 0.45 SHOW
34 4N4I Zinc finger MYND domain-containing protein 11 Mus musculus Q8R5C8 (ZMY11_MOUSE) N-TRIMETHYLLYSINE M3L 0.45 SHOW
35 6G29 Histone-lysine N-methyltransferase NSD3 Homo sapiens Q9BZ95 (NSD3_HUMAN) 5-methyl-2-piperidin-4-yl-6-pyridin-4-yl-pyridazin-3-one EHK 0.45 SHOW
36 6L1F PHD finger protein 20-like protein 1 Homo sapiens A8MW92 (P20L1_HUMAN) N-METHYL-LYSINE MLZ 0.43 SHOW
37 6L1P PHD finger protein 20-like protein 1 Homo sapiens A8MW92 (P20L1_HUMAN) 4-(1-methyl-3,6-dihydro-2H-pyridin-4-yl)phenol E3X 0.43 SHOW
38 5NRS DNA (cytosine-5)-methyltransferase 3B Homo sapiens Q9UBC3 (DNM3B_HUMAN) (2~{S})-1-[2-hydroxyethyl-[(2~{S})-2-oxidanylpropyl]amino]propan-2-ol 962 0.43 SHOW
39 6BPI Histone-lysine N-methyltransferase SETDB1 Homo sapiens Q15047 (SETB1_HUMAN) N-DIMETHYL-LYSINE MLY 0.43 SHOW
40 6G2O Histone-lysine N-methyltransferase NSD3 Homo sapiens Q9BZ95 (NSD3_HUMAN) [4-[5-(7-fluoranylquinolin-4-yl)-1-methyl-imidazol-4-yl]-3,5-dimethyl-phenyl]methanamine EJE 0.42 SHOW
41 3QKJ DNA (cytosine-5)-methyltransferase 3B Homo sapiens Q9UBC3 (DNM3B_HUMAN) 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL BTB 0.42 SHOW
42 2LTO Tudor domain-containing protein 3 Homo sapiens Q9H7E2 (TDRD3_HUMAN) NG,NG-DIMETHYL-L-ARGININE DA2 0.41 SHOW
43 5NV0 DNA (cytosine-5)-methyltransferase 3B Homo sapiens Q9UBC3 (DNM3B_HUMAN) 4-(dipropylamino)butanenitrile 9AH 0.41 SHOW
44 6MXY TP53-binding protein 1 Homo sapiens Q12888 (TP53B_HUMAN) N-[3-(tert-butylamino)propyl]-3-(trifluoromethyl)benzamide K6M 0.41 SHOW
45 6VIL BAH and coiled-coil domain-containing protein 1 Mus musculus Q3UHR0 (BAHC1_MOUSE) N-TRIMETHYLLYSINE M3L 0.41 SHOW
46 2LVM TP53-binding protein 1 Homo sapiens Q12888 (TP53B_HUMAN) N-DIMETHYL-LYSINE MLY 0.41 SHOW
47 6G2B Histone-lysine N-methyltransferase NSD3 Homo sapiens Q9BZ95 (NSD3_HUMAN) 4-(3-methyl-5-phenyl-imidazol-4-yl)pyridine EH8 0.41 SHOW
48 5NRR DNA (cytosine-5)-methyltransferase 3B Homo sapiens Q9UBC3 (DNM3B_HUMAN) 5-[2-hydroxyethyl(propyl)amino]pentan-1-ol 96E 0.41 SHOW