PDB Entry (6g2o) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 6g2o | Resolution: 1.81 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 31285596 | DOI: 10.1038/s41589-019-0310-x | |
Protein |
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Protein Name: Histone-lysine N-methyltransferase NSD3 | |
Protein Class: TRANSCRIPTION REGULATOR | |
Uniprot ID/ACC: Q9BZ95 (NSD3_HUMAN) | Organism: Homo sapiens |
Gene Symbol: NSD3 | Gene ID: 54904 |
Pocket Descriptors | |
Volume: 410.112 | Depth: 15.641 |
Hydrophobicity: 0.725 | Drug Score: 0.397925 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: [4-[5-(7-fluoranylquinolin-4-yl)-1-methyl-imidazol-4-yl]-3,5-dimethyl-phenyl]methanamine | ||
HET ID: EJE | PubChem: 138115329 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: NCc1cc(C)c(c(c1)C)c1ncn(c1c1ccnc2c1ccc(c2)F)C | ||
Standard InChI: InChI=1S/C22H21FN4/c1-13-8-15(11-24)9-14(2)20(13)21-22(27(3)12-26-21)18-6-7-25-19-10-16(23)4-5-17(18)19/h4-10,12H,11,24H2,1-3H3 | ||
Molecular Formula: C22H21FN4 | Mol. Weight: 360.42734 | Heavy Atoms: 27 |
Charge: 0 | Is Chiral: False | logP: 5.2172 |
HBD: 1 | HBA: 4 | TPSA: 56.73 |
#Bonds: 30 | #Rotatable Bonds: 3 | Shape Complexity: 0.18181819 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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