PDB Entry (6g2o)

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Visualizer: MichelaNGLo

PDB ID: 6g2o Resolution: 1.81 Å Exp. Method: X-RAY DIFFRACTION
PMID: 31285596 DOI: 10.1038/s41589-019-0310-x
Protein
Protein Name: Histone-lysine N-methyltransferase NSD3
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: Q9BZ95 (NSD3_HUMAN) Organism: Homo sapiens
Gene Symbol: NSD3 Gene ID: 54904
Pocket Descriptors
Volume: 410.112 Depth: 15.641
Hydrophobicity: 0.725 Drug Score: 0.397925
Pocket Similarity: Calculate
Ligand
Ligand Name:   [4-[5-(7-fluoranylquinolin-4-yl)-1-methyl-imidazol-4-yl]-3,5-dimethyl-phenyl]methanamine
HET ID:   EJE PubChem:   138115329
DrugBank:   - ChEMBL:   -
Canonical SMILES:   NCc1cc(C)c(c(c1)C)c1ncn(c1c1ccnc2c1ccc(c2)F)C
Standard InChI:   InChI=1S/C22H21FN4/c1-13-8-15(11-24)9-14(2)20(13)21-22(27(3)12-26-21)18-6-7-25-19-10-16(23)4-5-17(18)19/h4-10,12H,11,24H2,1-3H3
Molecular Formula:   C22H21FN4 Mol. Weight:   360.42734 Heavy Atoms:   27
Charge:   0 Is Chiral:   False logP:   5.2172
HBD:   1 HBA:   4 TPSA:   56.73
#Bonds:   30 #Rotatable Bonds:   3 Shape Complexity:   0.18181819
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-