PDB Entry (6g29)

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Visualizer: MichelaNGLo

PDB ID: 6g29 Resolution: 1.7 Å Exp. Method: X-RAY DIFFRACTION
PMID: 31285596 DOI: 10.1038/s41589-019-0310-x
Protein
Protein Name: Histone-lysine N-methyltransferase NSD3
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: Q9BZ95 (NSD3_HUMAN) Organism: Homo sapiens
Gene Symbol: NSD3 Gene ID: 54904
Pocket Descriptors
Volume: 296.704 Depth: 10.6207
Hydrophobicity: 0.684211 Drug Score: 0.277533
Pocket Similarity: Calculate
Ligand
Ligand Name:   5-methyl-2-piperidin-4-yl-6-pyridin-4-yl-pyridazin-3-one
HET ID:   EHK PubChem:   138115346
DrugBank:   - ChEMBL:   -
Canonical SMILES:   Cc1cc(=O)n(nc1c1ccncc1)C1CCNCC1
Standard InChI:   InChI=1S/C15H18N4O/c1-11-10-14(20)19(13-4-8-17-9-5-13)18-15(11)12-2-6-16-7-3-12/h2-3,6-7,10,13,17H,4-5,8-9H2,1H3
Molecular Formula:   C15H18N4O Mol. Weight:   270.32962 Heavy Atoms:   20
Charge:   0 Is Chiral:   False logP:   1.867
HBD:   1 HBA:   5 TPSA:   59.81
#Bonds:   22 #Rotatable Bonds:   2 Shape Complexity:   0.4
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-