PDB Entry (6g29) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 6g29 | Resolution: 1.7 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 31285596 | DOI: 10.1038/s41589-019-0310-x | |
Protein |
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Protein Name: Histone-lysine N-methyltransferase NSD3 | |
Protein Class: TRANSCRIPTION REGULATOR | |
Uniprot ID/ACC: Q9BZ95 (NSD3_HUMAN) | Organism: Homo sapiens |
Gene Symbol: NSD3 | Gene ID: 54904 |
Pocket Descriptors | |
Volume: 296.704 | Depth: 10.6207 |
Hydrophobicity: 0.684211 | Drug Score: 0.277533 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: 5-methyl-2-piperidin-4-yl-6-pyridin-4-yl-pyridazin-3-one | ||
HET ID: EHK | PubChem: 138115346 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: Cc1cc(=O)n(nc1c1ccncc1)C1CCNCC1 | ||
Standard InChI: InChI=1S/C15H18N4O/c1-11-10-14(20)19(13-4-8-17-9-5-13)18-15(11)12-2-6-16-7-3-12/h2-3,6-7,10,13,17H,4-5,8-9H2,1H3 | ||
Molecular Formula: C15H18N4O | Mol. Weight: 270.32962 | Heavy Atoms: 20 |
Charge: 0 | Is Chiral: False | logP: 1.867 |
HBD: 1 | HBA: 5 | TPSA: 59.81 |
#Bonds: 22 | #Rotatable Bonds: 2 | Shape Complexity: 0.4 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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