PDB Entry (5nrv)

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Visualizer: MichelaNGLo

PDB ID: 5nrv Resolution: 2.08 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: None
Protein
Protein Name: DNA (cytosine-5)-methyltransferase 3B
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: Q9UBC3 (DNM3B_HUMAN) Organism: Homo sapiens
Gene Symbol: DNMT3B Gene ID: 1789
Pocket Descriptors
Volume: 160.768 Depth: 10.245
Hydrophobicity: 0.762712 Drug Score: 0.429803
Pocket Similarity: Calculate
Ligand
Ligand Name:   6-dipropylamino-1-hexanol
HET ID:   96K PubChem:   142645
DrugBank:   - ChEMBL:   -
Canonical SMILES:   CCCN(CCC)CCCCCCO
Standard InChI:   InChI=1S/C12H27NO/c1-3-9-13(10-4-2)11-7-5-6-8-12-14/h14H,3-12H2,1-2H3
Molecular Formula:   C12H27NO Mol. Weight:   201.34888 Heavy Atoms:   14
Charge:   0 Is Chiral:   False logP:   2.6611
HBD:   1 HBA:   2 TPSA:   23.47
#Bonds:   13 #Rotatable Bonds:   10 Shape Complexity:   1.0
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-