PDB Entry (5nrv) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 5nrv | Resolution: 2.08 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: None | |
Protein |
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Protein Name: DNA (cytosine-5)-methyltransferase 3B | |
Protein Class: TRANSCRIPTION REGULATOR | |
Uniprot ID/ACC: Q9UBC3 (DNM3B_HUMAN) | Organism: Homo sapiens |
Gene Symbol: DNMT3B | Gene ID: 1789 |
Pocket Descriptors | |
Volume: 160.768 | Depth: 10.245 |
Hydrophobicity: 0.762712 | Drug Score: 0.429803 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: 6-dipropylamino-1-hexanol | ||
HET ID: 96K | PubChem: 142645 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: CCCN(CCC)CCCCCCO | ||
Standard InChI: InChI=1S/C12H27NO/c1-3-9-13(10-4-2)11-7-5-6-8-12-14/h14H,3-12H2,1-2H3 | ||
Molecular Formula: C12H27NO | Mol. Weight: 201.34888 | Heavy Atoms: 14 |
Charge: 0 | Is Chiral: False | logP: 2.6611 |
HBD: 1 | HBA: 2 | TPSA: 23.47 |
#Bonds: 13 | #Rotatable Bonds: 10 | Shape Complexity: 1.0 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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