PDB Entry (6g27)

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Visualizer: MichelaNGLo

PDB ID: 6g27 Resolution: 1.65 Å Exp. Method: X-RAY DIFFRACTION
PMID: 31285596 DOI: 10.1038/s41589-019-0310-x
Protein
Protein Name: Histone-lysine N-methyltransferase NSD3
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: Q9BZ95 (NSD3_HUMAN) Organism: Homo sapiens
Gene Symbol: NSD3 Gene ID: 54904
Pocket Descriptors
Volume: 308.224 Depth: 10.9252
Hydrophobicity: 0.69697 Drug Score: 0.406662
Pocket Similarity: Calculate
Ligand
Ligand Name:   5-methyl-6-phenyl-2-piperidin-4-yl-pyridazin-3-one
HET ID:   EHE PubChem:   66510155
DrugBank:   - ChEMBL:   -
Canonical SMILES:   Cc1cc(=O)n(nc1c1ccccc1)C1CCNCC1
Standard InChI:   InChI=1S/C16H19N3O/c1-12-11-15(20)19(14-7-9-17-10-8-14)18-16(12)13-5-3-2-4-6-13/h2-6,11,14,17H,7-10H2,1H3
Molecular Formula:   C16H19N3O Mol. Weight:   269.34155 Heavy Atoms:   20
Charge:   0 Is Chiral:   False logP:   2.472
HBD:   1 HBA:   4 TPSA:   46.92
#Bonds:   22 #Rotatable Bonds:   2 Shape Complexity:   0.375
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-