PDB Entry (6g2e)

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Visualizer: MichelaNGLo

PDB ID: 6g2e Resolution: 1.85 Å Exp. Method: X-RAY DIFFRACTION
PMID: 31285596 DOI: 10.1038/s41589-019-0310-x
Protein
Protein Name: Histone-lysine N-methyltransferase NSD3
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: Q9BZ95 (NSD3_HUMAN) Organism: Homo sapiens
Gene Symbol: NSD3 Gene ID: 54904
Pocket Descriptors
Volume: 300.096 Depth: 9.97597
Hydrophobicity: 0.714286 Drug Score: 0.407096
Pocket Similarity: Calculate
Ligand
Ligand Name:   [3,5-dimethyl-4-(1-methyl-5-pyridin-4-yl-imidazol-4-yl)phenyl]methanamine
HET ID:   EHH PubChem:   138115332
DrugBank:   - ChEMBL:   -
Canonical SMILES:   NCc1cc(C)c(c(c1)C)c1ncn(c1c1ccncc1)C
Standard InChI:   InChI=1S/C18H20N4/c1-12-8-14(10-19)9-13(2)16(12)17-18(22(3)11-21-17)15-4-6-20-7-5-15/h4-9,11H,10,19H2,1-3H3
Molecular Formula:   C18H20N4 Mol. Weight:   292.3782 Heavy Atoms:   22
Charge:   0 Is Chiral:   False logP:   3.9249
HBD:   1 HBA:   4 TPSA:   56.73
#Bonds:   24 #Rotatable Bonds:   3 Shape Complexity:   0.22222222
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-