48 complex(es)
PDB ID
Protein Name
Organism
Uniprot ID/ACC
Ligand Name
HET ID
Structure
PS-Score (Pocket Similarity)
Card
1 4HCZ PHD finger protein 1 Homo sapiens O43189 (PHF1_HUMAN) N-TRIMETHYLLYSINE M3L 0.91 SHOW
2 6WAU PHD finger protein 19 Homo sapiens Q5T6S3 (PHF19_HUMAN) N-TRIMETHYLLYSINE M3L 0.89 SHOW
3 6WAV PHD finger protein 19 Homo sapiens Q5T6S3 (PHF19_HUMAN) N-TRIMETHYLLYSINE M3L 0.86 SHOW
4 6WAT PHD finger protein 1 Homo sapiens O43189 (PHF1_HUMAN) N-TRIMETHYLLYSINE M3L 0.85 SHOW
5 4BD3 PHD finger protein 19 Homo sapiens Q5T6S3 (PHF19_HUMAN) N-TRIMETHYLLYSINE M3L 0.85 SHOW
6 5XFR Metal-response element-binding transcription factor 2 Homo sapiens Q9Y483 (MTF2_HUMAN) N-TRIMETHYLLYSINE M3L 0.72 SHOW
7 5VAR Lysine-specific demethylase 4A Homo sapiens O75164 (KDM4A_HUMAN) (1R,2S,3R,4S)-3-[(dimethylamino)methyl]-1-phenylbicyclo[2.2.1]heptan-2-ol 92Y 0.6 SHOW
8 3QKJ DNA (cytosine-5)-methyltransferase 3B Homo sapiens Q9UBC3 (DNM3B_HUMAN) 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL BTB 0.52 SHOW
9 5NRR DNA (cytosine-5)-methyltransferase 3B Homo sapiens Q9UBC3 (DNM3B_HUMAN) 5-[2-hydroxyethyl(propyl)amino]pentan-1-ol 96E 0.51 SHOW
10 2M0O PHD finger protein 1 Homo sapiens O43189 (PHF1_HUMAN) N-TRIMETHYLLYSINE M3L 0.51 SHOW
11 5NRS DNA (cytosine-5)-methyltransferase 3B Homo sapiens Q9UBC3 (DNM3B_HUMAN) (2~{S})-1-[2-hydroxyethyl-[(2~{S})-2-oxidanylpropyl]amino]propan-2-ol 962 0.5 SHOW
12 5NV0 DNA (cytosine-5)-methyltransferase 3B Homo sapiens Q9UBC3 (DNM3B_HUMAN) 4-(dipropylamino)butanenitrile 9AH 0.5 SHOW
13 6MXX TP53-binding protein 1 Homo sapiens Q12888 (TP53B_HUMAN) N-[3-(tert-butylamino)propyl]-3-iodobenzamide K6P 0.5 SHOW
14 4RG2 TP53-binding protein 1 Homo sapiens Q12888 (TP53B_HUMAN) 3-bromo-N-[3-(tert-butylamino)propyl]benzamide 3OO 0.49 SHOW
15 5NRV DNA (cytosine-5)-methyltransferase 3B Homo sapiens Q9UBC3 (DNM3B_HUMAN) 6-dipropylamino-1-hexanol 96K 0.49 SHOW
16 5D6Y Lysine-specific demethylase 4A Homo sapiens O75164 (KDM4A_HUMAN) N-TRIMETHYLLYSINE M3L 0.49 SHOW
17 6MXY TP53-binding protein 1 Homo sapiens Q12888 (TP53B_HUMAN) N-[3-(tert-butylamino)propyl]-3-(trifluoromethyl)benzamide K6M 0.48 SHOW
18 6MXZ TP53-binding protein 1 Homo sapiens Q12888 (TP53B_HUMAN) N-[3-(tert-butylamino)propyl]-3-(propan-2-yl)benzamide K6S 0.48 SHOW
19 5CIU DNA (cytosine-5)-methyltransferase 3B Homo sapiens Q9UBC3 (DNM3B_HUMAN) N-TRIMETHYLLYSINE M3L 0.47 SHOW
20 6UPT TP53-binding protein 1 Homo sapiens Q12888 (TP53B_HUMAN) 2-((2-chlorobenzyl)thio)-4,5-dihydro-1H-imidazole QFM 0.47 SHOW
21 4IUT Protein SAWADEE HOMEODOMAIN HOMOLOG 1 Arabidopsis thaliana Q9XI47 (SHH1_ARATH) N-DIMETHYL-LYSINE MLY 0.45 SHOW
22 4N4H Zinc finger MYND domain-containing protein 11 Mus musculus Q8R5C8 (ZMY11_MOUSE) N-TRIMETHYLLYSINE M3L 0.44 SHOW
23 4N4I Zinc finger MYND domain-containing protein 11 Mus musculus Q8R5C8 (ZMY11_MOUSE) N-TRIMETHYLLYSINE M3L 0.44 SHOW
24 2GFA Lysine-specific demethylase 4A Homo sapiens O75164 (KDM4A_HUMAN) N-TRIMETHYLLYSINE M3L 0.44 SHOW
25 3R93 M-phase phosphoprotein 8 Homo sapiens Q99549 (MPP8_HUMAN) N-TRIMETHYLLYSINE M3L 0.43 SHOW
26 6V2H Chromodomain Y-like protein 2 Homo sapiens Q8N8U2 (CDYL2_HUMAN) N-TRIMETHYLLYSINE M3L 0.43 SHOW
27 5NV2 DNA (cytosine-5)-methyltransferase 3B Homo sapiens Q9UBC3 (DNM3B_HUMAN) (2~{S})-6-methyl-~{N}-propan-2-yl-heptan-2-amine 9AE 0.43 SHOW
28 6IIS Hepatoma-derived growth factor-related protein 3 Homo sapiens Q9Y3E1 (HDGR3_HUMAN) N-TRIMETHYLLYSINE M3L 0.43 SHOW
29 6V41 Testis-specific chromodomain protein Y 1 Homo sapiens Q9Y6F8 (CDY1_HUMAN) N-TRIMETHYLLYSINE M3L 0.43 SHOW
30 6L1P PHD finger protein 20-like protein 1 Homo sapiens A8MW92 (P20L1_HUMAN) 4-(1-methyl-3,6-dihydro-2H-pyridin-4-yl)phenol E3X 0.43 SHOW
31 6V2D Chromodomain Y-like protein 2 Homo sapiens Q8N8U2 (CDYL2_HUMAN) N~6~,N~6~-diethyl-L-lysine ELY 0.43 SHOW
32 2X4Y Peregrin Homo sapiens P55201 (BRPF1_HUMAN) N-TRIMETHYLLYSINE M3L 0.42 SHOW
33 3QO2 M-phase phosphoprotein 8 Homo sapiens Q99549 (MPP8_HUMAN) N-TRIMETHYLLYSINE M3L 0.42 SHOW
34 4QUF RE36324p Drosophila melanogaster Q7JXA8 (Q7JXA8_DROME) N-TRIMETHYLLYSINE M3L 0.42 SHOW
35 6V2S M-phase phosphoprotein 8 Homo sapiens Q99549 (MPP8_HUMAN) N~6~,N~6~-diethyl-L-lysine ELY 0.42 SHOW
36 5NVO DNA (cytosine-5)-methyltransferase 3B Homo sapiens Q9UBC3 (DNM3B_HUMAN) CHOLINE ION CHT 0.42 SHOW
37 2X4X Peregrin Homo sapiens P55201 (BRPF1_HUMAN) N-TRIMETHYLLYSINE M3L 0.41 SHOW
38 6L10 PHD finger protein 20-like protein 1 Homo sapiens A8MW92 (P20L1_HUMAN) 2-(N-MORPHOLINO)-ETHANESULFONIC ACID MES 0.41 SHOW
39 5NR3 DNA (cytosine-5)-methyltransferase 3B Homo sapiens Q9UBC3 (DNM3B_HUMAN) Ethambutol 95E 0.41 SHOW
40 6IAU amine dehydrogenases Cystobacter fuscus S9Q235 (S9Q235_9DELT) CYCLOHEXYLAMMONIUM ION HAI 0.41 SHOW
41 2ZJV Acetylcholine-binding protein Lymnaea stagnalis P58154 (ACHP_LYMST) 1-[(2-chloro-1,3-thiazol-5-yl)methyl]-3-methyl-2-nitroguanidine CT4 0.41 SHOW
42 6IIT Hepatoma-derived growth factor-related protein 3 Homo sapiens Q9Y3E1 (HDGR3_HUMAN) N-DIMETHYL-LYSINE MLY 0.41 SHOW
43 6V2R Chromobox protein homolog 7 Homo sapiens O95931 (CBX7_HUMAN) N~6~,N~6~-diethyl-L-lysine ELY 0.41 SHOW
44 3GV6 Chromobox protein homolog 6 Homo sapiens O95503 (CBX6_HUMAN) N-TRIMETHYLLYSINE M3L 0.41 SHOW
45 6G25 Histone-lysine N-methyltransferase NSD3 Homo sapiens Q9BZ95 (NSD3_HUMAN) 3,5-dimethyl-4-(4-pyridin-4-yl-1~{H}-pyrazol-3-yl)-1,2-oxazole EHQ 0.41 SHOW
46 2R5M Polycomb protein Scm Drosophila melanogaster Q9VHA0 (SCM_DROME) N-METHYL-LYSINE MLZ 0.41 SHOW
47 6G2O Histone-lysine N-methyltransferase NSD3 Homo sapiens Q9BZ95 (NSD3_HUMAN) [4-[5-(7-fluoranylquinolin-4-yl)-1-methyl-imidazol-4-yl]-3,5-dimethyl-phenyl]methanamine EJE 0.41 SHOW
48 2R5A Polycomb protein Scm Drosophila melanogaster Q9VHA0 (SCM_DROME) N-METHYL-LYSINE MLZ 0.41 SHOW