PDB Entry (4rg2) Download |
||
Visualizer: MichelaNGLo |
||
PDB ID: 4rg2 | Resolution: 1.5 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 25590533 | DOI: 10.1021/cb500956g | |
Protein |
|
Protein Name: TP53-binding protein 1 | |
Protein Class: TRANSCRIPTION REGULATOR | |
Uniprot ID/ACC: Q12888 (TP53B_HUMAN) | Organism: Homo sapiens |
Gene Symbol: TP53BP1 | Gene ID: 7158 |
Pocket Descriptors | |
Volume: 535.808 | Depth: 12.9058 |
Hydrophobicity: 0.780822 | Drug Score: 0.796956 |
Pocket Similarity: Calculate |
Ligand |
||
Ligand Name: 3-bromo-N-[3-(tert-butylamino)propyl]benzamide | ||
HET ID: 3OO | PubChem: 78673861 | |
DrugBank: - | ChEMBL: CHEMBL4172977 | |
Canonical SMILES: Brc1cccc(c1)C(=O)NCCCNC(C)(C)C | ||
Standard InChI: InChI=1S/C14H21BrN2O/c1-14(2,3)17-9-5-8-16-13(18)11-6-4-7-12(15)10-11/h4,6-7,10,17H,5,8-9H2,1-3H3,(H,16,18) | ||
Molecular Formula: C14H21BrN2O | Mol. Weight: 313.23334 | Heavy Atoms: 18 |
Charge: 0 | Is Chiral: False | logP: 3.7389 |
HBD: 2 | HBA: 3 | TPSA: 41.13 |
#Bonds: 18 | #Rotatable Bonds: 7 | Shape Complexity: 0.5 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
|
Database Name | Value |
BindingDB | Kd : 22000 nM, Kd : 29000 nM, Kd : 30000 nM |