Ligand Download |
||
Ligand Name: N-TRIMETHYLLYSINE | ||
HET ID: M3L | PubChem: 440121, 6992003 | |
DrugBank: DB03977 | ChEMBL: CHEMBL1234168 | |
Canonical SMILES: OC(=O)[C@H](CCCC[N+](C)(C)C)N | ||
Standard InChI: InChI=1S/C9H20N2O2/c1-11(2,3)7-5-4-6-8(10)9(12)13/h8H,4-7,10H2,1-3H3/p+1/t8-/m0/s1 | ||
Molecular Formula: C9H21N2O2+ | Mol. Weight: 189.27524 | Heavy Atoms: 13 |
Charge: 1 | Is Chiral: True | logP: 0.9751 |
HBD: 2 | HBA: 3 | TPSA: 63.32 |
#Bonds: 13 | #Rotatable Bonds: 6 | Shape Complexity: 0.8888889 |
Stereocomplexity: 0.11111111 |
Bound Proteins |
Protein Name | Uniprot ID/ACC | Organism | PDB ID | Binding Affinity | Binding Database | Complex Card |
a plant-specific histone reader SHORT LIFE (SHL) | B9H0V2 (B9H0V2_POPTR) | Populus trichocarpa | 5ZNP |
- |
- |
SHOW |
PHD finger protein ALFIN-LIKE 1 | Q9M2B4 (ALFL3_ARATH) | Arabidopsis thaliana | 5YC4 |
- |
- |
SHOW |
Chromobox protein homolog 7 | O95931 (CBX7_HUMAN) | Homo sapiens | 2L12 |
- |
- |
SHOW |
WD_REPEATS_REGION domain-containing protein | G0S8H7 (G0S8H7_CHATD) | Chaetomium thermophilum | 5WFC |
- |
- |
SHOW |
Nucleosome-remodeling factor subunit BPTF | Q12830 (BPTF_HUMAN) | Homo sapiens | 2FUU |
- |
- |
SHOW |
Polycomb group protein Pc | P26017 (PC_DROME) | Drosophila melanogaster | 1PDQ |
- |
- |
SHOW |
Lysine-specific demethylase 4A | O75164 (KDM4A_HUMAN) | Homo sapiens | 5D6Y |
- |
- |
SHOW |
Spindlin-2B | Q9BPZ2 (SPI2B_HUMAN) | Homo sapiens | 5LUG |
- |
- |
SHOW |
a plant-specific histone reader SHORT LIFE (SHL) | B9H0V2 (B9H0V2_POPTR) | Populus trichocarpa | 5ZNR |
- |
- |
SHOW |
Spindlin-4 | Q56A73 (SPIN4_HUMAN) | Homo sapiens | 4UY4 |
- |
- |
SHOW |
Spindlin-1 | Q9Y657 (SPIN1_HUMAN) | Homo sapiens | 7BQZ |
- |
- |
SHOW |
Lysine-specific demethylase 7 homolog | Q9GYI0 (KDM7_CAEEL) | Caenorhabditis elegans | 3N9Q |
- |
- |
SHOW |
Polycomb protein EED | O75530 (EED_HUMAN) | Homo sapiens | 3IIY |
- |
- |
SHOW |
Chromobox protein homolog 7 | O95931 (CBX7_HUMAN) | Homo sapiens | 2L1B |
- |
- |
SHOW |
E3 ubiquitin-protein ligase TRIM33 | Q9UPN9 (TRI33_HUMAN) | Homo sapiens | 3U5O |
- |
- |
SHOW |
Lysine-specific demethylase 4A | O75164 (KDM4A_HUMAN) | Homo sapiens | 2QQS |
- |
- |
SHOW |
Protein YNG1 | Q08465 (YNG1_YEAST) | Saccharomyces cerevisiae | 2JMJ |
- |
- |
SHOW |
V(D)J recombination-activating protein 2 | P21784 (RAG2_MOUSE) | Mus musculus | 2V85 |
- |
- |
SHOW |
MORC family CW-type zinc finger protein 3 | F7BJB9 (MORC3_MOUSE) | Mus musculus | 5IX1 |
- |
- |
SHOW |
SAGA-associated factor 29 | P25554 (SGF29_YEAST) | Saccharomyces cerevisiae | 3MP1 |
- |
- |
SHOW |
Chromodomain-helicase-DNA-binding protein 1 | O14646 (CHD1_HUMAN) | Homo sapiens | 2B2W |
- |
- |
SHOW |
Chromodomain Y-like protein 2 | Q8N8U2 (CDYL2_HUMAN) | Homo sapiens | 6V2H |
- |
- |
SHOW |
PHD finger protein 13 | Q86YI8 (PHF13_HUMAN) | Homo sapiens | 3O7A |
- |
- |
SHOW |
Zinc finger CW-type PWWP domain protein 1 | Q504Y3 (ZCPW2_HUMAN) | Homo sapiens | 4Z0R |
- |
- |
SHOW |
Lysine-specific demethylase 7 homolog | Q9GYI0 (KDM7_CAEEL) | Caenorhabditis elegans | 3N9L |
- |
- |
SHOW |
SAGA-associated factor 29 | Q96ES7 (SGF29_HUMAN) | Homo sapiens | 3ME9 |
- |
- |
SHOW |
Histone-lysine N-methyltransferase 2A | Q03164 (KMT2A_HUMAN) | Homo sapiens | 3LQJ |
- |
- |
SHOW |
Chromobox protein homolog 5 | P45973 (CBX5_HUMAN) | Homo sapiens | 3FDT |
- |
- |
SHOW |
COMPASS component SPP1 | Q03012 (SPP1_YEAST) | Saccharomyces cerevisiae | 6J2P |
- |
- |
SHOW |
E3 ubiquitin-protein ligase UHRF1 | Q96T88 (UHRF1_HUMAN) | Homo sapiens | 5YY9 |
- |
- |
SHOW |
Hepatoma-derived growth factor-related protein 3 | Q9Y3E1 (HDGR3_HUMAN) | Homo sapiens | 6IIS |
- |
- |
SHOW |
Transcription initiation factor TFIID subunit 3 | Q5HZG4 (TAF3_MOUSE) | Mus musculus | 2K17 |
- |
- |
SHOW |
Polycomb protein EED | O75530 (EED_HUMAN) | Homo sapiens | 5HYN |
- |
- |
SHOW |
Polycomb protein EED | O75530 (EED_HUMAN) | Homo sapiens | 5TTW |
- |
- |
SHOW |
WD_REPEATS_REGION domain-containing protein | G0S8H7 (G0S8H7_CHATD) | Chaetomium thermophilum | 5M5G |
- |
- |
SHOW |
Polycomb protein EED | O75530 (EED_HUMAN) | Homo sapiens | 3JPX |
- |
- |
SHOW |
SAGA-associated factor 29 | Q96ES7 (SGF29_HUMAN) | Homo sapiens | 3MEA |
- |
- |
SHOW |
M-phase phosphoprotein 8 | Q99549 (MPP8_HUMAN) | Homo sapiens | 3R93 |
- |
- |
SHOW |
AT-rich interactive domain-containing protein 5 | Q6NQ79 (ARID4_ARATH) | Arabidopsis thaliana | 6LQE |
- |
- |
SHOW |
Chromodomain-helicase-DNA-binding protein 1 | O14646 (CHD1_HUMAN) | Homo sapiens | 2B2T |
- |
- |
SHOW |
Spindlin-1 | Q9Y657 (SPIN1_HUMAN) | Homo sapiens | 7BQZ |
- |
- |
SHOW |
Chromobox protein homolog 3 | Q13185 (CBX3_HUMAN) | Homo sapiens | 2L11 |
- |
- |
SHOW |
WD_REPEATS_REGION domain-containing protein | G0S8H7 (G0S8H7_CHATD) | Chaetomium thermophilum | 5KKL |
- |
- |
SHOW |
V(D)J recombination-activating protein 2 | P21784 (RAG2_MOUSE) | Mus musculus | 2V86 |
- |
- |
SHOW |
Hepatoma-derived growth factor-related protein 2 | Q7Z4V5 (HDGR2_HUMAN) | Homo sapiens | 3QBY |
- |
- |
SHOW |
E3 ubiquitin-protein ligase UHRF1 | Q96T88 (UHRF1_HUMAN) | Homo sapiens | 3DB3 |
- |
- |
SHOW |
Peregrin | P55201 (BRPF1_HUMAN) | Homo sapiens | 2X4X |
- |
- |
SHOW |
Polycomb protein EED | O75530 (EED_HUMAN) | Homo sapiens | 5LS6 |
- |
- |
SHOW |
Polycomb protein EED | O75530 (EED_HUMAN) | Homo sapiens | 3IJ1 |
- |
- |
SHOW |
Chromobox protein homolog 3 | Q13185 (CBX3_HUMAN) | Homo sapiens | 3DM1 |
- |
- |
SHOW |
Polycomb protein EED | O75530 (EED_HUMAN) | Homo sapiens | 3K27 |
- |
- |
SHOW |
Chromobox protein homolog 6 | O95503 (CBX6_HUMAN) | Homo sapiens | 3GV6 |
- |
- |
SHOW |
Heterochromatin protein 1 | P05205 (HP1_DROME) | Drosophila melanogaster | 6AT0 |
- |
- |
SHOW |
E3 ubiquitin-protein ligase UHRF1 | Q96T88 (UHRF1_HUMAN) | Homo sapiens | 3ASK |
- |
- |
SHOW |
Protein partner of snf, isoform A | Q9VG78 (Q9VG78_DROME) | Drosophila melanogaster | 5WLE |
- |
- |
SHOW |
Pygopus homolog 1 | Q9D0P5 (PYGO1_MOUSE) | Mus musculus | 2YYR |
- |
- |
SHOW |
Inhibitor of growth protein 4 | Q9UNL4 (ING4_HUMAN) | Homo sapiens | 2PNX |
- |
- |
SHOW |
Lysine-specific demethylase 7 homolog | Q9GYI0 (KDM7_CAEEL) | Caenorhabditis elegans | 3N9P |
- |
- |
SHOW |
Zinc finger MYND domain-containing protein 11 | Q8R5C8 (ZMY11_MOUSE) | Mus musculus | 4N4I |
- |
- |
SHOW |
Spindlin-1 | Q9Y657 (SPIN1_HUMAN) | Homo sapiens | 4MZH |
- |
- |
SHOW |
Transcription initiation factor TFIID subunit 3 | Q5VWG9 (TAF3_HUMAN) | Homo sapiens | 5WXH |
- |
- |
SHOW |
Death-inducer obliterator 1 | Q9BTC0 (DIDO1_HUMAN) | Homo sapiens | 4L7X |
- |
- |
SHOW |
304M3-B Fab | None () | Homo sapiens | 4YHY |
- |
- |
SHOW |
E3 ubiquitin-protein ligase UHRF1 | Q96T88 (UHRF1_HUMAN) | Homo sapiens | 4GY5 |
- |
- |
SHOW |
Histone-lysine N-methyltransferase SETDB1 | Q15047 (SETB1_HUMAN) | Homo sapiens | 6BHE |
- |
- |
SHOW |
Spindlin-1 | Q9Y657 (SPIN1_HUMAN) | Homo sapiens | 4MZF |
- |
- |
SHOW |
Protein MRG2 | Q4V3E2 (MRG2_ARATH) | Arabidopsis thaliana | 4PLL |
- |
- |
SHOW |
Spindlin-1 | Q9Y657 (SPIN1_HUMAN) | Homo sapiens | 5Y5W |
- |
- |
SHOW |
Protein MRG2 | Q4V3E2 (MRG2_ARATH) | Arabidopsis thaliana | 4PLI |
- |
- |
SHOW |
V(D)J recombination-activating protein 2 | P21784 (RAG2_MOUSE) | Mus musculus | 2V83 |
- |
- |
SHOW |
Polycomb protein EED | O75530 (EED_HUMAN) | Homo sapiens | 3JZG |
- |
- |
SHOW |
Chromodomain Y-like protein 2 | Q8N8U2 (CDYL2_HUMAN) | Homo sapiens | 6V3N |
- |
- |
SHOW |
304M3-B Fab | None () | Homo sapiens | 4YHP |
- |
- |
SHOW |
Spindlin-1 | Q9Y657 (SPIN1_HUMAN) | Homo sapiens | 7BU9 |
- |
- |
SHOW |
Chromobox protein homolog 7 | Q8VDS3 (CBX7_MOUSE) | Mus musculus | 4X3S |
- |
- |
SHOW |
SAGA-associated factor 29 | Q96ES7 (SGF29_HUMAN) | Homo sapiens | 3MEU |
- |
- |
SHOW |
V(D)J recombination-activating protein 2 | P21784 (RAG2_MOUSE) | Mus musculus | 2V87 |
- |
- |
SHOW |
MORC family CW-type zinc finger protein 3 | Q14149 (MORC3_HUMAN) | Homo sapiens | 4QQ4 |
- |
- |
SHOW |
Chromo domain-containing protein 1 | Q10103 (CHP1_SCHPO) | Schizosaccharomyces pombe | 2RSN |
- |
- |
SHOW |
Polycomb protein EED | O75530 (EED_HUMAN) | Homo sapiens | 6C23 |
- |
- |
SHOW |
PHD finger protein 1 | O43189 (PHF1_HUMAN) | Homo sapiens | 4HCZ |
- |
- |
SHOW |
Chromobox protein homolog 5 | Q61686 (CBX5_MOUSE) | Mus musculus | 2RVN |
- |
- |
SHOW |
Chromobox protein homolog 6 | O95503 (CBX6_HUMAN) | Homo sapiens | 3I90 |
- |
- |
SHOW |
Protein SAWADEE HOMEODOMAIN HOMOLOG 1 | Q9XI47 (SHH1_ARATH) | Arabidopsis thaliana | 4IUR |
- |
- |
SHOW |
Zinc finger CW-type PWWP domain protein 1 | Q9H0M4 (ZCPW1_HUMAN) | Homo sapiens | 2RR4 |
- |
- |
SHOW |
DNA (cytosine-5)-methyltransferase 3B | Q9UBC3 (DNM3B_HUMAN) | Homo sapiens | 5CIU |
- |
- |
SHOW |
WD_REPEATS_REGION domain-containing protein | G0S8H7 (G0S8H7_CHATD) | Chaetomium thermophilum | 5KJH |
- |
- |
SHOW |
M-phase phosphoprotein 8 | Q99549 (MPP8_HUMAN) | Homo sapiens | 3QO2 |
- |
- |
SHOW |
AT-rich interactive domain-containing protein 5 | Q6NQ79 (ARID4_ARATH) | Arabidopsis thaliana | 6LQF |
- |
- |
SHOW |
Chromobox protein homolog 8 | Q9HC52 (CBX8_HUMAN) | Homo sapiens | 3I91 |
- |
- |
SHOW |
Zinc finger MYND domain-containing protein 11 | Q8R5C8 (ZMY11_MOUSE) | Mus musculus | 4N4H |
- |
- |
SHOW |
Metal-response element-binding transcription factor 2 | Q9Y483 (MTF2_HUMAN) | Homo sapiens | 5XFR |
- |
- |
SHOW |
Lysine-specific demethylase 5A | P29375 (KDM5A_HUMAN) | Homo sapiens | 2KGI |
- |
- |
SHOW |
Lysine-specific demethylase 7 homolog | Q9GYI0 (KDM7_CAEEL) | Caenorhabditis elegans | 3N9N |
- |
- |
SHOW |
Heterochromatin protein 1 | P05205 (HP1_DROME) | Drosophila melanogaster | 6MHA |
- |
- |
SHOW |
Heterochromatin protein 1 | P05205 (HP1_DROME) | Drosophila melanogaster | 1KNE |
- |
- |
SHOW |
Protein MRG2 | Q4V3E2 (MRG2_ARATH) | Arabidopsis thaliana | 4PL6 |
- |
- |
SHOW |
Inhibitor of growth protein 4 | Q9UNL4 (ING4_HUMAN) | Homo sapiens | 2VNF |
- |
- |
SHOW |
Testis-specific chromodomain protein Y 1 | Q9Y6F8 (CDY1_HUMAN) | Homo sapiens | 6V41 |
- |
- |
SHOW |
Chromodomain-helicase-DNA-binding protein 1 | O14646 (CHD1_HUMAN) | Homo sapiens | 4NW2 |
- |
- |
SHOW |
Polycomb group protein Pc | P26017 (PC_DROME) | Drosophila melanogaster | 1PFB |
- |
- |
SHOW |
PHD finger protein 19 | Q5T6S3 (PHF19_HUMAN) | Homo sapiens | 6WAV |
- |
- |
SHOW |
PHD finger protein 1 | O43189 (PHF1_HUMAN) | Homo sapiens | 2M0O |
- |
- |
SHOW |
RE36324p | Q7JXA8 (Q7JXA8_DROME) | Drosophila melanogaster | 4QUF |
- |
- |
SHOW |
MORC family CW-type zinc finger protein 3 | Q14149 (MORC3_HUMAN) | Homo sapiens | 5SVX |
- |
- |
SHOW |
PHD finger protein 8 | Q9UPP1 (PHF8_HUMAN) | Homo sapiens | 3KV4 |
- |
- |
SHOW |
Hepatoma-derived growth factor-related protein 2 | Q7Z4V5 (HDGR2_HUMAN) | Homo sapiens | 3QJ6 |
- |
- |
SHOW |
Spindlin-1 | Q9Y657 (SPIN1_HUMAN) | Homo sapiens | 4MZG |
- |
- |
SHOW |
Lysine-specific demethylase 5A | P29375 (KDM5A_HUMAN) | Homo sapiens | 3GL6 |
- |
- |
SHOW |
Chromatin remodeling protein EBS | F4JL28 (EBS_ARATH) | Arabidopsis thaliana | 5Z8L |
- |
- |
SHOW |
BAH and coiled-coil domain-containing protein 1 | Q3UHR0 (BAHC1_MOUSE) | Mus musculus | 6VIL |
- |
- |
SHOW |
Peregrin | P55201 (BRPF1_HUMAN) | Homo sapiens | 2X4Y |
- |
- |
SHOW |
PHD finger protein 19 | Q5T6S3 (PHF19_HUMAN) | Homo sapiens | 6WAU |
- |
- |
SHOW |
Polycomb protein EED | O75530 (EED_HUMAN) | Homo sapiens | 3K26 |
- |
- |
SHOW |
Polycomb protein EED | O75530 (EED_HUMAN) | Homo sapiens | 3JZH |
- |
- |
SHOW |
Polycomb protein EED | O75530 (EED_HUMAN) | Homo sapiens | 6C24 |
- |
- |
SHOW |
PHD finger protein 1 | O43189 (PHF1_HUMAN) | Homo sapiens | 6WAT |
- |
- |
SHOW |
RE36324p | Q7JXA8 (Q7JXA8_DROME) | Drosophila melanogaster | 4U68 |
- |
- |
SHOW |
PHD finger protein ALFIN-LIKE 1 | Q9FFF5 (ALFL1_ARATH) | Arabidopsis thaliana | 5Y20 |
- |
- |
SHOW |
Lysine-specific demethylase 7 homolog | Q9GYI0 (KDM7_CAEEL) | Caenorhabditis elegans | 3N9O |
- |
- |
SHOW |
PHD finger protein 19 | Q5T6S3 (PHF19_HUMAN) | Homo sapiens | 4BD3 |
- |
- |
SHOW |
Lysine-specific demethylase 4A | O75164 (KDM4A_HUMAN) | Homo sapiens | 2GFA |
- |
- |
SHOW |
Transcription initiation factor TFIID subunit 3 | Q5VWG9 (TAF3_HUMAN) | Homo sapiens | 5XMY |
- |
- |
SHOW |
Polycomb protein EED | O75530 (EED_HUMAN) | Homo sapiens | 3IJ0 |
- |
- |
SHOW |
PHD finger protein 1 | Q9Z1B8 (PHF1_MOUSE) | Mus musculus | 5XFQ |
- |
- |
SHOW |
304M3-B Fab | None () | Homo sapiens | 4YHZ |
- |
- |
SHOW |
Chromodomain-helicase-DNA-binding protein 1 | O14646 (CHD1_HUMAN) | Homo sapiens | 2B2U |
- |
- |
SHOW |
Chromobox protein homolog 1 | P83916 (CBX1_HUMAN) | Homo sapiens | 6D07 |
- |
- |
SHOW |
Inhibitor of growth protein 5 | Q8WYH8 (ING5_HUMAN) | Homo sapiens | 3C6W |
- |
- |
SHOW |
Zinc finger CW-type PWWP domain protein 1 | Q504Y3 (ZCPW2_HUMAN) | Homo sapiens | 4O62 |
- |
- |
SHOW |
Polycomb protein EED | O75530 (EED_HUMAN) | Homo sapiens | 4X3E |
- |
- |
SHOW |
PHD finger protein 2 | O75151 (PHF2_HUMAN) | Homo sapiens | 3KQI |
- |
- |
SHOW |
Chromo domain-containing protein 1 | Q10103 (CHP1_SCHPO) | Schizosaccharomyces pombe | 3G7L |
- |
- |
SHOW |
Polycomb protein EED | O75530 (EED_HUMAN) | Homo sapiens | 3IIW |
- |
- |
SHOW |
Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic | Q43088 (RBCMT_PEA) | Pisum sativum | 2H23 |
- |
- |
SHOW |
Chromobox protein homolog 7 | Q8VDS3 (CBX7_MOUSE) | Mus musculus | 4X3K |
- |
- |
SHOW |
Peregrin | P55201 (BRPF1_HUMAN) | Homo sapiens | 2X4W |
- |
- |
SHOW |
Peregrin | P55201 (BRPF1_HUMAN) | Homo sapiens | 3MO8 |
- |
- |
SHOW |
V(D)J recombination-activating protein 2 | P21784 (RAG2_MOUSE) | Mus musculus | 2V89 |
- |
- |
SHOW |
SAGA-associated factor 29 | Q96ES7 (SGF29_HUMAN) | Homo sapiens | 3MEV |
- |
- |
SHOW |
Nucleosome-remodeling factor subunit BPTF | Q12830 (BPTF_HUMAN) | Homo sapiens | 2F6J |
- |
- |
SHOW |
Chromobox protein homolog 2 | Q14781 (CBX2_HUMAN) | Homo sapiens | 3H91 |
- |
- |
SHOW |
Chromobox protein homolog 7 | O95931 (CBX7_HUMAN) | Homo sapiens | 4MN3 |
- |
- |
SHOW |
Histone-lysine N-methyltransferase SETDB1 | Q15047 (SETB1_HUMAN) | Homo sapiens | 6BHI |
- |
- |
SHOW |
Inhibitor of growth protein 1 | Q9UK53 (ING1_HUMAN) | Homo sapiens | 2QIC |
- |
- |
SHOW |
Inhibitor of growth protein 2 | Q9ESK4 (ING2_MOUSE) | Mus musculus | 2G6Q |
- |
- |
SHOW |
Spindlin-1 | Q9Y657 (SPIN1_HUMAN) | Homo sapiens | 4H75 |
- |
- |
SHOW |
Heterochromatin protein 1 | P05205 (HP1_DROME) | Drosophila melanogaster | 6ASZ |
- |
- |
SHOW |