Ligand
Ligand Name:   5-NO2dUMP
Ligand Type:   DNA linking
Ligand ID:   COVPDB1141 PubChem:   149015
Synonym(s):  
  •   unii-m5xxz2mq75
  • 2'-deoxy-5-nitrouridine 5'-(dihydrogen phosphate)
  • m5xxz2mq75
  • 5-nitro-2'-deoxyuridylic acid
  • chembl1234672
  • 63689-79-2
  • 5-nitro-2'-deoxyuridylate
  • schembl9590644
  • dtxsid30213085
  • bdbm50010241
  • 5'-uridylic acid, 2'-deoxy-5-nitro-
  • [(2r,3s,5r)-3-hydroxy-5-(5-nitro-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methyl dihydrogen phosphate
  • 2'-deoxy-5-nitrouridine 5'-phosphoric acid
  • q27283526
  • q27463760
  • [(2r,3s,5r)-3-hydroxy-5-(5-nitro-2,4-dioxo-pyrimidin-1-yl)oxolan-2-yl]methyl dihydrogen phosphate
  • ndn
show 16 synonym(s)
DrugBank:   - ChEMBL:   CHEMBL1234672
Canonical SMILES:   O[C@H]1C[C@@H](O[C@@H]1COP(O)(O)=O)n1cc([N+]([O-])=O)c(=O)[nH]c1=O
Standard InChI:   InChI=1S/C9H12N3O10P/c13-5-1-7(22-6(5)3-21-23(18,19)20)11-2-4(12(16)17)8(14)10-9(11)15/h2,5-7,13H,1,3H2,(H,10,14,15)(H2,18,19,20)/t5-,6+,7+/m0/s1
Molecular Formula:   C9H12N3O10P Mol. Weight:   353.02603 logP:   -1.7975
HBD:   4 HBA:   9
#Rotatable Bonds:   5 TPSA:   194.22

Bound Proteins
Protein Name Uniprot ID/ACC Organism PDB ID HET Code Binding Affinity Binding Database Complex Card
Thymidylate synthase P0A884 (TYSY_ECOLI) Escherichia coli (strain K12) 3BFI NDU
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SHOW
Thymidylate synthase P0A884 (TYSY_ECOLI) Escherichia coli (strain K12) 3BHR NDU
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SHOW
Thymidylate synthase P0A884 (TYSY_ECOLI) Escherichia coli (strain K12) 3BHL NDU
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SHOW
Thymidylate synthase P0A884 (TYSY_ECOLI) Escherichia coli (strain K12) 3B9H NDU
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SHOW