Ligand
Ligand Name:   penicillin V
Ligand Type:   non-polymer
Ligand ID:   COVPDB176 PubChem:   6869
Synonym(s):  
  •   phenoxymethylpenicillin
  • oracillin
  • penicillin phenoxymethyl
  • phenomycilline
  • fenospen
  • phenoxymethyl penicillin
  • 87-08-1
  • v-cillin
  • beromycin
  • phenoxymethylenepenicillinic acid
  • phenoximethylpenicillinum
  • fenoximetilpenicilina
  • pen-v
  • phenoxymethylpenicillinic acid
  • phenoxymethylpenicilline
  • phenoxymethylpenicillinum
  • phenopenicillin
  • 6-phenoxyacetamidopenicillanic acid
  • penapar-vk
  • meropenin
  • fenossimetilpenicillina [dcit]
  • phenoxomethylpenicillin
  • phenocillin
  • stabicillin
  • vebecillin
  • fenacilin
  • oratren
  • apopen
  • ospen
  • fenoximetilpenicilina [inn-spanish]
  • distaquaine v
  • eskacillian v
  • v-tablopen
  • pen-vee
  • acipen v
  • pen-oral
  • v-cyline
  • penicillin-vk
  • v-cil
  • betapen-vk
  • beepen-vk
  • veetids
  • unii-z61i075u2w
  • chebi:27446
  • calcipen
  • rocilin
  • (2s,5r,6r)-3,3-dimethyl-7-oxo-6-[(2-phenoxyacetyl)amino]-4-thia-1-azabicyclo[3.2.0]heptane-2-carboxylic acid
  • (2s,5r,6r)-3,3-dimethyl-7-oxo-6-[(phenoxyacetyl)amino]-4-thia-1-azabicyclo[3.2.0]heptane-2-carboxylic acid
  • compocillin v
  • eskacillin v
  • crystapen v
  • v-cylina
  • phenoxymethylpenicillin (inn)
  • (2s,5r,6r)-3,3-dimethyl-7-oxo-6-(2-phenoxyacetamido)-4-thia-1- azabicyclo(3.2.0)heptane-2-carboxylic acid
  • z61i075u2w
  • p-mega-tablinen
  • (2s,5r,6r)-3,3-dimethyl-7-oxo-6-(2-phenoxyacetamido)-4-thia-1-azabicyclo(3.2.0)heptane-2-carboxylic acid
  • pnv
  • fenossimetilpenicillina
  • (2s,5r,6r)-3,3-dimethyl-7-oxo-6-(2-phenoxyacetamido)-4-thia-1-azabicyclo[3.2.0]heptane-2-carboxylic acid
  • phenoxymethylpenicillin [inn]
  • penicillanic acid, 6-phenoxyacetamido-
  • (2s,5r,6r)-3,3-dimethyl-7-oxo-6-{[(phenyloxy)acetyl]amino}-4-thia-1-azabicyclo[3.2.0]heptane-2-carboxylic acid
  • phenoxymethylpenicilline [inn-french]
  • phenoxymethylpenicillinum [inn-latin]
  • ccris 752
  • v-cillin (tn)
  • penicillin v (usp)
  • hsdb 6314
  • phenoxomethylpenicillanyl
  • phenoxymethylpenicillanyl
  • 4-thia-1-azabicyclo(3.2.0)heptane-2-carboxylic acid, 3,3-dimethyl-7-oxo-6-(2-phenoxyacetamido)-
  • einecs 201-722-0
  • brn 0096259
  • penicillin v [usan:usp]
  • phenoxymethylpenicillinic acid potassium salt
  • penicillinv
  • penicillin-v-potassium
  • 3,3-dimethyl-7-oxo-6-((phenyloxyacetyl)amino)-4-thia-1-azabicyclo(3.2.0)heptane-2-carboxylic acid
  • 4-thia-1-azabicyclo(3.2.0)heptane-2-carboxylic acid, 3,3-dimethyl-7-oxo-6-((phenoxyacetyl)amino)-, (2s-(2alpha,5alpha,6beta))-
  • pc pen vk
  • spectrum_001007
  • spectrum2_000495
  • spectrum3_000543
  • spectrum4_000472
  • spectrum5_001409
  • chembl615
  • epitope id:115011
  • epitope id:116056
  • schembl49223
  • bspbio_002185
  • kbiogr_000944
  • kbioss_001487
  • 4-27-00-05884 (beilstein handbook reference)
  • mls001304105
  • divk1c_000779
  • spbio_000389
  • dtxsid3023429
  • schembl22099709
  • chebi:53706
  • gtpl10920
  • kbio1_000779
  • kbio2_001487
  • kbio2_004055
  • kbio2_006623
  • kbio3_001685
  • ninds_000779
  • zinc3831282
  • 2,2-dimethyl-6beta-[(phenoxyacetyl)amino]penam-3alpha-carboxylic acid
  • bdbm50370584
  • 3,3-dimethyl-6beta-[(phenoxyacetyl)amino]penam-2alpha-carboxylic acid (pin)
  • akos015969737
  • db00417
  • idi1_000779
  • smr000539431
  • sbi-0051477.p003
  • ab00514745
  • c08126
  • d05411
  • q422215
  • w-109316
  • brd-k43966364-237-02-2
  • brd-k43966364-237-03-0
  • phenoxymethylpenicillin 100 microg/ml in acetonitrile
  • 6beta-phenoxyacetamido-2,2-dimethylpenam-3alpha-carboxylic acid
  • phenoxymethylpenicillin, antibiotic for culture media use only
  • penicillin v, united states pharmacopeia (usp) reference standard
  • phenoxymethylpenicillin, european pharmacopoeia (ep) reference standard
show 127 synonym(s)
DrugBank:   DB00417 ChEMBL:   CHEMBL615
Canonical SMILES:   CC1(C)S[C@@H]2[C@H](NC(=O)COc3ccccc3)C(=O)N2[C@H]1C(O)=O
Standard InChI:   InChI=1S/C16H18N2O5S/c1-16(2)12(15(21)22)18-13(20)11(14(18)24-16)17-10(19)8-23-9-6-4-3-5-7-9/h3-7,11-12,14H,8H2,1-2H3,(H,17,19)(H,21,22)/t11-,12+,14-/m1/s1
Molecular Formula:   C16H18N2O5S Mol. Weight:   350.09363 logP:   0.6971
HBD:   2 HBA:   5
#Rotatable Bonds:   5 TPSA:   95.94

Bound Proteins
Protein Name Uniprot ID/ACC Organism PDB ID HET Code Binding Affinity Binding Database Complex Card
D-alanyl-D-alanine carboxypeptidase DacB P24228 (DACB_ECOLI) Escherichia coli (strain K12) 2EX9 35P
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Peptidoglycan glycosyltransferase C8W8H7 (C8W8H7_ATOPD) Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus) 4QJG 35P
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