PDB Entry (6ett)

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Visualizer: MichelaNGLo

PDB ID: 6ett Resolution: 1.26 Å Exp. Method: X-RAY DIFFRACTION
PMID: 31475772 DOI: 10.1002/cmdc.201900441
Protein
Protein Name: Lysine-specific demethylase 4D
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: Q6B0I6 (KDM4D_HUMAN) Organism: Homo sapiens
Gene Symbol: KDM4D Gene ID: 55693
Pocket Descriptors
Volume: 2110.85 Depth: 29.6162
Hydrophobicity: 0.675906 Drug Score: 0.999898
Pocket Similarity: Calculate
Ligand
Ligand Name:   ethyl 2-(2~{H}-1,2,3,4-tetrazol-5-yl)ethanoate
HET ID:   BXH PubChem:   543616
DrugBank:   - ChEMBL:   CHEMBL1528738
Canonical SMILES:   CCOC(=O)Cc1n[nH]nn1
Standard InChI:   InChI=1S/C5H8N4O2/c1-2-11-5(10)3-4-6-8-9-7-4/h2-3H2,1H3,(H,6,7,8,9)
Molecular Formula:   C5H8N4O2 Mol. Weight:   156.14262 Heavy Atoms:   11
Charge:   0 Is Chiral:   False logP:   -0.6947
HBD:   1 HBA:   5 TPSA:   80.76
#Bonds:   12 #Rotatable Bonds:   4 Shape Complexity:   0.6
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
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