PDB Entry (3wmb)

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Visualizer: MichelaNGLo

PDB ID: 3wmb Resolution: 2.7 Å Exp. Method: X-RAY DIFFRACTION
PMID: 25155420 DOI: 10.1038/srep06188
Protein
Protein Name: Beta-hexosaminidase
Protein Class: HYDROLASE
Uniprot ID/ACC: Q06GJ0 (Q06GJ0_OSTFU) Organism: Ostrinia furnacalis
Gene Symbol: - Gene ID: -
Pocket Descriptors
Volume: 696.64 Depth: 18.4265
Hydrophobicity: 0.669643 Drug Score: 0.431385
Pocket Similarity: Calculate
Ligand
Ligand Name:   2-(2-{[(5-methyl-1,3,4-thiadiazol-2-yl)methyl]amino}ethyl)-1H-benzo[de]isoquinoline-1,3(2H)-dione
HET ID:   NF1 PubChem:   86223063
DrugBank:   - ChEMBL:   -
Canonical SMILES:   Cc1nnc(s1)CNCCn1c(=O)c2cccc3c2c(c1=O)ccc3
Standard InChI:   InChI=1S/C18H16N4O2S/c1-11-20-21-15(25-11)10-19-8-9-22-17(23)13-6-2-4-12-5-3-7-14(16(12)13)18(22)24/h2-7,19H,8-10H2,1H3
Molecular Formula:   C18H16N4O2S Mol. Weight:   352.41025 Heavy Atoms:   25
Charge:   0 Is Chiral:   False logP:   2.2933
HBD:   1 HBA:   7 TPSA:   105.12
#Bonds:   28 #Rotatable Bonds:   5 Shape Complexity:   0.22222222
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-