Protein
Protein Name Pyridoxal 5'-phosphate synthase subunit PDX1.3
#PDB ID 4
Organism Arabidopsis thaliana (Mouse-ear cress)
Uniprot ID/ACC Q8L940 (PDX13_ARATH)
Synonym(s)
  •   Aldolase-type TIM barrel family protein
  • AT5G01410
  • ARABIDOPSIS THALIANA PYRIDOXINE BIOSYNTHESIS 1.3
  • ATPDX1
  • ATPDX1.3
  • PDX1
  • PDX1.3
  • PYRIDOXINE BIOSYNTHESIS 1.3
  • REDUCED SUGAR RESPONSE 4
  • T10O8.120
  • T10O8_120
show 10 synonym(s)
Gene Symbol PDX13
Gene ID 831738
Sequence MEGTGVVAVYGNGAITEAKKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQMIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYIDESEVLTLADEDHHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVNGDIRVLRNMDDDEVFTFAKKLAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPEMLVEVSCGLGEAMVGINLNDEKVERFANRSE
Protein Class LYASE
Function Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by PDX2. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Also plays an indirect role in resistance to singlet oxygen-generating photosensitizers.
Bound Ligands
Ligand ID HET Code PDB ID Binding Affinity Binding Database Structure Complex Card
COVPDB324 6R3 5K2Z
-
-
SHOW
COVPDB280 5RP 5LNS
-
-
SHOW
COVPDB1014 K8P 5LNW
-
-
SHOW
COVPDB1033 KIK 5LNU
-
-
SHOW