Covpdb









Ligand
Ligand Name:   ribose-5-phosphate
Ligand Type:   RNA linking
Ligand ID:   COVPDB1126 PubChem:   440101
Synonym(s):  
  •   alpha-d-ribose 5-phosphate
  • 5-o-phosphono-alpha-d-ribofuranose
  • alpha-d-ribofuranose 5-phosphate
  • chebi:18189
  • alpha-d-ribofuranose 5-(dihydrogen phosphate)
  • hsx
  • 5-phospho-alpha-d-ribose
  • schembl187934
  • chembl605020
  • zinc4096190
  • c03736
  • q27102887
  • 5-o-phosphono-alpha-d-ribose; 5-o-phosphono-d-ribose; 5-o-phosphono-ribose
show 12 synonym(s)
DrugBank:   - ChEMBL:   CHEMBL605020
Canonical SMILES:   O[C@H]1O[C@H](COP(O)(O)=O)[C@@H](O)[C@H]1O
Standard InChI:   InChI=1S/C5H11O8P/c6-3-2(1-12-14(9,10)11)13-5(8)4(3)7/h2-8H,1H2,(H2,9,10,11)/t2-,3-,4-,5+/m1/s1
Molecular Formula:   C5H11O8P Mol. Weight:   230.01915 logP:   -2.4653
HBD:   5 HBA:   6
#Rotatable Bonds:   3 TPSA:   136.68

Bound Proteins
Protein Name Uniprot ID/ACC Organism PDB ID HET Code Binding Affinity Binding Database Complex Card
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase P29241 (NADA_APLCA) Aplysia californica (California sea hare) 1R16 N
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ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase P29241 (NADA_APLCA) Aplysia californica (California sea hare) 1R15 N
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