PDB Entry (9xia) |
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PDB ID: 9xia | Resolution: 1.9 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 2734296 | DOI: 10.1073/pnas.86.12.4440 | |
Protein |
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Protein Name: Xylose isomerase | |
Uniprot ID/ACC: P24300 (XYLA_STRRU) | Organism: Streptomyces rubiginosus |
Gene Symbol: xylA | Gene ID: - |
Protein Class: ISOMERASE |
Ligand |
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Ligand Name: (E)-3-deoxy-3-(fluoromethylidene)-D-glucose | ||
Canonical SMILES: OC[C@@H](O)[C@@H](O)C(=C/F)\[C@@H](O)C=O | ||
Standard InChI: InChI=1S/C7H11FO5/c8-1-4(5(11)2-9)7(13)6(12)3-10/h1-2,5-7,10-13H,3H2/b4-1-/t5-,6+,7-/m0/s1 | ||
HET Code: DFR | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C7H11FO5 | Mol. Weight: 194.05905 | logP: -1.8863 |
HBD: 4 | HBA: 5 | |
#Rotatable Bonds: 5 | TPSA: 97.99 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Composite Reaction | HIS 54 | A | None | 2.29 | Vinyl Halide |
Binding Affinity |
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