PDB Entry (4v08) |
||
| ||
PDB ID: 4v08 | Resolution: 2.03 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 26161660 | DOI: 10.1371/JOURNAL.PPAT.1005045 | |
Protein |
|
Protein Name: Capsid scaffolding protein | |
Uniprot ID/ACC: Q83417 (SCAF_SUHVK) | Organism: Suid herpesvirus 1 (strain Kaplan) (SuHV-1) (Pseudorabies virus (strain Kaplan)) |
Gene Symbol: - | Gene ID: 2952508 |
Protein Class: HYDROLASE |
Ligand |
||
Ligand Name: DIISOPROPYL PHOSPHATE | ||
Canonical SMILES: CC(C)OP(O)(=O)OC(C)C | ||
Standard InChI: InChI=1S/C6H15O4P/c1-5(2)9-11(7,8)10-6(3)4/h5-6H,1-4H3,(H,7,8) | ||
HET Code: DFP | PubChem: 74162 | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C6H15O4P | Mol. Weight: 182.0708 | logP: 1.9368 |
HBD: 1 | HBA: 3 | |
#Rotatable Bonds: 4 | TPSA: 55.76 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Phosphorylation | SER 109 | A | 23.46 | - | Phosphate |
Binding Affinity |
||
- |