PDB Entry (1h7o) |
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PDB ID: 1h7o | Resolution: 1.75 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 11545591 | DOI: 10.1006/JMBI.2001.4947 | |
Protein |
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Protein Name: Delta-aminolevulinic acid dehydratase | |
Uniprot ID/ACC: P05373 (HEM2_YEAST) | Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) |
Gene Symbol: HEM2 | Gene ID: 852842 |
Protein Class: LYASE |
Ligand |
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Ligand Name: 5-aminolaevulinic acid | ||
Canonical SMILES: NCC(=O)CCC(O)=O | ||
Standard InChI: InChI=1S/C5H9NO3/c6-3-4(7)1-2-5(8)9/h1-3,6H2,(H,8,9) | ||
HET Code: DAV | PubChem: 137 | |
DrugBank: DB00855 | ChEMBL: CHEMBL601 | |
Molecular Formula: C5H9NO3 | Mol. Weight: 131.05824 | logP: -0.621 |
HBD: 2 | HBA: 3 | |
#Rotatable Bonds: 4 | TPSA: 80.39 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Imine Condensation | LYS 263 | A | 11.15 | 4.55 | Ketone |
Binding Affinity |
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