PDB Entry (1h7o)
PDB ID: 1h7o Resolution: 1.75 Å Exp. Method: X-RAY DIFFRACTION
PMID: 11545591 DOI: 10.1006/JMBI.2001.4947
Protein
Protein Name: Delta-aminolevulinic acid dehydratase
Uniprot ID/ACC: P05373 (HEM2_YEAST) Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Gene Symbol: HEM2 Gene ID: 852842
Protein Class: LYASE
Ligand
Ligand Name:   5-aminolaevulinic acid
Canonical SMILES:   NCC(=O)CCC(O)=O
Standard InChI:   InChI=1S/C5H9NO3/c6-3-4(7)1-2-5(8)9/h1-3,6H2,(H,8,9)
HET Code:   DAV PubChem:   137
DrugBank:   DB00855 ChEMBL:   CHEMBL601
Molecular Formula:   C5H9NO3 Mol. Weight:   131.05824 logP:   -0.621
HBD:   2 HBA:   3
#Rotatable Bonds:   4 TPSA:   80.39
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Imine Condensation LYS 263 A 11.15 4.55 Ketone
Binding Affinity
-