PDB Entry (6kc5)
PDB ID: 6kc5 Resolution: 1.54 Å Exp. Method: X-RAY DIFFRACTION
PMID: 32246052 DOI: 10.1038/s42003-020-0882-8
Protein
Protein Name: E3 ubiquitin-protein ligase RNF31
Uniprot ID/ACC: Q96EP0 (RNF31_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: RNF31 Gene ID: 55072
Protein Class: LIGASE
Ligand
Ligand Name:   HOIPIN1
Canonical SMILES:   COc1ccccc1C(=O)\C=C\c1ccccc1C(O)=O
Standard InChI:   InChI=1S/C17H14O4/c1-21-16-9-5-4-8-14(16)15(18)11-10-12-6-2-3-7-13(12)17(19)20/h2-11H,1H3,(H,19,20)/b11-10+
HET Code:   D5U PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C17H14O4 Mol. Weight:   282.0892 logP:   3.2895
HBD:   1 HBA:   3
#Rotatable Bonds:   5 TPSA:   63.6
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 885 B 103.26 10.2 Vinyl Carbonyl
Binding Affinity
-