PDB Entry (3mxs) |
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PDB ID: 3mxs | Resolution: 1.24 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 21041505 | DOI: 10.1128/AAC.00930-10 | |
Protein |
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Protein Name: Beta-lactamase SHV-1 | |
Uniprot ID/ACC: P0AD64 (BLA1_KLEPN) | Organism: Klebsiella pneumoniae |
Gene Symbol: bla | Gene ID: - |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: N-[(dihydroxyboranyl)methyl]-Nalpha-[(4-ethyl-2,3-dioxopiperazin-1-yl)carbonyl]-D-tyrosinamide | ||
Canonical SMILES: Oc1ccc(cc1)C[C@H](C(=O)NCB(O)O)NC(=O)N2CCN(C(=O)C2=O)CC | ||
Standard InChI: InChI=1S/C17H23BN4O7/c1-2-21-7-8-22(16(26)15(21)25)17(27)20-13(14(24)19-10-18(28)29)9-11-3-5-12(23)6-4-11/h3-6,13,23,28-29H,2,7-10H2,1H3,(H,19,24)(H,20,27)/t13-/m1/s1 | ||
HET Code: CZ9 | PubChem: 49866865 | |
DrugBank: - | ChEMBL: CHEMBL1232028 | |
Molecular Formula: C17H23BN4O7 | Mol. Weight: 406.166 | logP: -2.1682 |
HBD: 5 | HBA: 7 | |
#Rotatable Bonds: 7 | TPSA: 159.51 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Borylation | SER 70 | A | 10.41 | - | Boronic Acid |
Binding Affinity |
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Database Name | Value |
PDBBind | Ki : 9800 nM |