PDB Entry (1ke0) |
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PDB ID: 1ke0 | Resolution: 2.3 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 12109906 | DOI: 10.1021/jm020002p | |
Protein |
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Protein Name: Beta-lactamase | |
Uniprot ID/ACC: P00811 (AMPC_ECOLI) | Organism: Escherichia coli (strain K12) |
Gene Symbol: ampC | Gene ID: 948669 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: 4-(carboxyvin-2-yl)phenylboronic acid | ||
Canonical SMILES: OB(O)c1ccc(\C=C\C(O)=O)cc1 | ||
Standard InChI: InChI=1S/C9H9BO4/c11-9(12)6-3-7-1-4-8(5-2-7)10(13)14/h1-6,13-14H,(H,11,12)/b6-3+ | ||
HET Code: CVB | PubChem: 5288001 | |
DrugBank: DB02503 | ChEMBL: CHEMBL139928 | |
Molecular Formula: C9H9BO4 | Mol. Weight: 192.05939 | logP: -0.5358 |
HBD: 3 | HBA: 3 | |
#Rotatable Bonds: 3 | TPSA: 77.76 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Borylation | SER 64 | A | 14.19 | - | Boronic Acid |
Binding Affinity |
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Database Name | Value |
PDBBind | Ki : 4200 nM |
BindingDB | Ki : 4200 nM |