PDB Entry (1hvb)
PDB ID: 1hvb Resolution: 1.17 Å Exp. Method: X-RAY DIFFRACTION
PMID: 11171967 DOI: 10.1073/pnas.98.4.1427
Protein
Protein Name: D-alanyl-D-alanine carboxypeptidase
Uniprot ID/ACC: P15555 (DAC_STRSR) Organism: Streptomyces sp. (strain R61)
Gene Symbol: - Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   (6R,7R)-3-[(3S)-3-[(4R)-4-carboxy-4-acetamidobutanamido]-3-{[(1R)-1-{[(1R)-1-carboxyethyl]carbamoyl}ethyl]carbamoyl}propyl]-8-oxo-7-(2-phenylacetamido)-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid
Canonical SMILES:   C[C@@H](NC(=O)[C@@H](C)NC(=O)[C@H](CCC1=C(N2[C@H](SC1)[C@H](NC(=O)Cc1ccccc1)C2=O)C(O)=O)NC(=O)CC[C@@H](NC(C)=O)C(O)=O)C(O)=O
Standard InChI:   InChI=1S/C32H40N6O12S/c1-15(26(42)34-16(2)30(45)46)33-27(43)20(36-22(40)12-11-21(31(47)48)35-17(3)39)10-9-19-14-51-29-24(28(44)38(29)25(19)32(49)50)37-23(41)13-18-7-5-4-6-8-18/h4-8,15-16,20-21,24,29H,9-14H2,1-3H3,(H,33,43)(H,34,42)(H,35,39)(H,36,40)(H,37,41)(H,45,46)(H,47,48)(H,49,50)/t15-,16-,20+,21-,24-,29-/m1/s1
HET Code:   CEH PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C32H40N6O12S Mol. Weight:   732.2425 logP:   -1.3038
HBD:   8 HBA:   10
#Rotatable Bonds:   18 TPSA:   277.71
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Beta-Lactam Addition SER 62 A 20.01 - Beta-Lactam
Binding Affinity
-