PDB Entry (2vt0) |
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PDB ID: 2vt0 | Resolution: 2.15 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 18783340 | DOI: 10.1515/BC.2008.163 | |
Protein |
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Protein Name: Lysosomal acid glucosylceramidase | |
Uniprot ID/ACC: P04062 (GLCM_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: GBA | Gene ID: 2629 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: conduritol-beta-epoxide | ||
Canonical SMILES: [C@@H]12[C@H](O2)[C@H](O)[C@@H](O)[C@H](O)[C@H]1O | ||
Standard InChI: InChI=1S/C6H10O5/c7-1-2(8)4(10)6-5(11-6)3(1)9/h1-10H/t1-,2-,3+,4+,5-,6+/m0/s1 | ||
HET Code: CBU | PubChem: 119054 | |
DrugBank: - | ChEMBL: CHEMBL291020 | |
Molecular Formula: C6H10O5 | Mol. Weight: 162.05283 | logP: -2.789 |
HBD: 4 | HBA: 5 | |
#Rotatable Bonds: 0 | TPSA: 93.45 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Epoxide Opening | GLU 340 | B | 17.34 | 9.57 | Epoxide |
Binding Affinity |
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