PDB Entry (5g4h)
PDB ID: 5g4h Resolution: 1.5 Å Exp. Method: X-RAY DIFFRACTION
PMID: 27888701 DOI: 10.1016/J.JINORGBIO.2016.11.016
Protein
Protein Name: Urease subunit alpha
Uniprot ID/ACC: A0A0H3YL32 (A0A0H3YL32_SPOPA) Organism: Sporosarcina pasteurii (Bacillus pasteurii)
Gene Symbol: ureC Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   CATECHOL
Canonical SMILES:   Oc1ccccc1O
Standard InChI:   InChI=1S/C6H6O2/c7-5-3-1-2-4-6(5)8/h1-4,7-8H
HET Code:   CAQ PubChem:   289
DrugBank:   DB02232 ChEMBL:   CHEMBL280998
Molecular Formula:   C6H6O2 Mol. Weight:   110.03678 logP:   1.0978
HBD:   2 HBA:   2
#Rotatable Bonds:   0 TPSA:   40.46
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Aromatic Substitution CYS 322 C 82.89 11.08 Catechol
Binding Affinity
-