PDB Entry (1ref) |
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PDB ID: 1ref | Resolution: 1.8 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 8755744 | DOI: 10.1021/bi953052n | |
Protein |
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Protein Name: Endo-1,4-beta-xylanase 2 | |
Uniprot ID/ACC: P36217 (XYN2_HYPJR) | Organism: Hypocrea jecorina (strain ATCC 56765 / BCRC 32924 / NRRL 11460 / Rut C-30) (Trichoderma reesei) |
Gene Symbol: xyn2 | Gene ID: - |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: 2,3-EPOXYPROPYL-BETA-D-XYLOSIDE | ||
Canonical SMILES: C1O[C@H]1CO[C@H]2[C@H](O)[C@@H](O)[C@@H](CO2)O | ||
Standard InChI: InChI=1S/C8H14O6/c9-5-3-14-8(7(11)6(5)10)13-2-4-1-12-4/h4-11H,1-3H2/t4-,5-,6+,7-,8-/m1/s1 | ||
HET Code: C3X | PubChem: 5287868 | |
DrugBank: - | ChEMBL: CHEMBL1231593 | |
Molecular Formula: C8H14O6 | Mol. Weight: 206.07904 | logP: -2.1592 |
HBD: 3 | HBA: 6 | |
#Rotatable Bonds: 3 | TPSA: 91.68 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Epoxide Opening | GLU 86 | B | 16.91 | 7.52 | Epoxide |
Binding Affinity |
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