PDB Entry (6jn3) |
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PDB ID: 6jn3 | Resolution: 2.22 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 31269398 | DOI: 10.1021/acs.jmedchem.9b00735 | |
Protein |
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Protein Name: Carbapenem-hydrolyzing beta-lactamase KPC | |
Uniprot ID/ACC: Q9F663 (BLKPC_KLEPN) | Organism: Klebsiella pneumoniae |
Gene Symbol: bla | Gene ID: 56982589 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: MS05 | ||
Canonical SMILES: SC[C@@H](C)C(=O)N[C@H](B(O)O)Cc1ccccc1 | ||
Standard InChI: InChI=1S/C12H18BNO3S/c1-9(8-18)12(15)14-11(13(16)17)7-10-5-3-2-4-6-10/h2-6,9,11,16-18H,7-8H2,1H3,(H,14,15)/t9-,11+/m1/s1 | ||
HET Code: BX6 | PubChem: 138455168 | |
DrugBank: - | ChEMBL: CHEMBL4454286 | |
Molecular Formula: C12H18BNO3S | Mol. Weight: 267.11005 | logP: 0.2918 |
HBD: 4 | HBA: 4 | |
#Rotatable Bonds: 6 | TPSA: 69.56 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Borylation | SER 70 | A | 11.02 | - | Boronic Acid |
Binding Affinity |
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