PDB Entry (3o86)
PDB ID: 3o86 Resolution: 1.6 Å Exp. Method: X-RAY DIFFRACTION
PMID: 20945905 DOI: 10.1021/jm101015z
Protein
Protein Name: Beta-lactamase
Uniprot ID/ACC: P00811 (AMPC_ECOLI) Organism: Escherichia coli (strain K12)
Gene Symbol: ampC Gene ID: 948669
Protein Class: HYDROLASE
Ligand
Ligand Name:   (phenylmethylsulfonylamino)methylboronic acid
Canonical SMILES:   OB(O)CNS(=O)(=O)Cc1ccccc1
Standard InChI:   InChI=1S/C8H12BNO4S/c11-9(12)7-10-15(13,14)6-8-4-2-1-3-5-8/h1-5,10-12H,6-7H2
HET Code:   BSF PubChem:   49837085
DrugBank:   - ChEMBL:   CHEMBL1231476
Molecular Formula:   C8H12BNO4S Mol. Weight:   229.05801 logP:   -0.882
HBD:   3 HBA:   4
#Rotatable Bonds:   5 TPSA:   86.63
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Borylation SER 64 A 13.12 - Boronic Acid
Binding Affinity
Database Name Value
PDBBind Ki : 70 nM