PDB Entry (1gbh)
PDB ID: 1gbh Resolution: 2.2 Å Exp. Method: X-RAY DIFFRACTION
PMID: 7500345 DOI: 10.1006/jmbi.1995.0650
Protein
Protein Name: Alpha-lytic protease
Uniprot ID/ACC: P00778 (PRLA_LYSEN) Organism: Lysobacter enzymogenes
Gene Symbol: alphaLP Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   N-(4-methoxy-4-oxobutanoyl)-L-alanyl-L-alanyl-N-[(1R)-1-(dihydroxyboranyl)-3-methylbutyl]-L-prolinamide
Canonical SMILES:   COC(=O)CCC(=O)N[C@@H](C)C(=O)N[C@@H](C)C(=O)N1CCC[C@H]1C(=O)N[C@H](B(O)O)CC(C)C
Standard InChI:   InChI=1S/C21H37BN4O8/c1-12(2)11-16(22(32)33)25-20(30)15-7-6-10-26(15)21(31)14(4)24-19(29)13(3)23-17(27)8-9-18(28)34-5/h12-16,32-33H,6-11H2,1-5H3,(H,23,27)(H,24,29)(H,25,30)/t13-,14-,15-,16-/m0/s1
HET Code:   BLE PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C21H37BN4O8 Mol. Weight:   484.27045 logP:   -1.5171
HBD:   5 HBA:   8
#Rotatable Bonds:   12 TPSA:   174.37
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Borylation SER 195 A 11.45 - Boronic Acid
Binding Affinity
-