PDB Entry (6ocg)
PDB ID: 6ocg Resolution: 1.83 Å Exp. Method: X-RAY DIFFRACTION
PMID: 31235910 DOI: 10.1038/s41594-019-0242-x
Protein
Protein Name: Tubulinyl-Tyr carboxypeptidase 1
Uniprot ID/ACC: Q7L8A9 (VASH1_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: VASH1 Gene ID: 22846
Protein Class: HYDROLASE
Ligand
Ligand Name:   EpoY
Canonical SMILES:   CCOC(=O)[C@H]1O[C@@H]1C(=O)N[C@@H](Cc1ccc(O)cc1)C(O)=O
Standard InChI:   InChI=1S/C15H17NO7/c1-2-22-15(21)12-11(23-12)13(18)16-10(14(19)20)7-8-3-5-9(17)6-4-8/h3-6,10-12,17H,2,7H2,1H3,(H,16,18)(H,19,20)/t10-,11-,12-/m0/s1
HET Code:   BJL PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C15H17NO7 Mol. Weight:   323.1005 logP:   -0.1654
HBD:   3 HBA:   6
#Rotatable Bonds:   7 TPSA:   125.46
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Epoxide Opening CYS 169 A 26.38 14.17 Epoxide
Binding Affinity
-