PDB Entry (6j8q)
PDB ID: 6j8q Resolution: 1.79 Å Exp. Method: X-RAY DIFFRACTION
PMID: 31269398 DOI: 10.1021/acs.jmedchem.9b00735
Protein
Protein Name: Carbapenem-hydrolyzing beta-lactamase KPC
Uniprot ID/ACC: Q9F663 (BLKPC_KLEPN) Organism: Klebsiella pneumoniae
Gene Symbol: bla Gene ID: 56982589
Protein Class: HYDROLASE
Ligand
Ligand Name:   WL-001
Canonical SMILES:   SC[C@@H](C)C(=O)N[C@H](B(O)O)c1ccc(F)cc1
Standard InChI:   InChI=1S/C11H15BFNO3S/c1-7(6-18)11(15)14-10(12(16)17)8-2-4-9(13)5-3-8/h2-5,7,10,16-18H,6H2,1H3,(H,14,15)/t7-,10+/m1/s1
HET Code:   BHU PubChem:   138753149
DrugBank:   - ChEMBL:   CHEMBL4453017
Molecular Formula:   C11H15BFNO3S Mol. Weight:   271.08496 logP:   0.5609
HBD:   4 HBA:   4
#Rotatable Bonds:   5 TPSA:   69.56
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Borylation SER 70 D 11.59 - Boronic Acid
Binding Affinity
-