PDB Entry (2gdv)
PDB ID: 2gdv Resolution: 2.0 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Sucrose phosphorylase
Uniprot ID/ACC: A0ZZH6 (SUCP_BIFAA) Organism: Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a)
Gene Symbol: sucP Gene ID: -
Protein Class: TRANSFERASE
Ligand
Ligand Name:   beta-D-glucose
Canonical SMILES:   OC[C@@H]1[C@@H](O)[C@H](O)[C@@H](O)[C@@H](O1)O
Standard InChI:   InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6-/m1/s1
HET Code:   BGC PubChem:   64689
DrugBank:   DB02379 ChEMBL:   CHEMBL1614854
Molecular Formula:   C6H12O6 Mol. Weight:   180.06339 logP:   -3.2214
HBD:   5 HBA:   6
#Rotatable Bonds:   1 TPSA:   110.38
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Acyl Substitution ASP 192 A 13.59 10.34 Hemiacetal
Binding Affinity
-