PDB Entry (6sz4) |
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PDB ID: 6sz4 | Resolution: 1.75 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 31740581 | DOI: 10.1074/jbc.RA119.011435 | |
Protein |
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Protein Name: Putative acetyl xylan esterase | |
Uniprot ID/ACC: B1ZMF4 (B1ZMF4_OPITP) | Organism: Opitutus terrae (strain DSM 11246 / JCM 15787 / PB90-1) |
Gene Symbol: Oter_0116 | Gene ID: - |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: D-glucuronic acid | ||
Canonical SMILES: O[C@@H]1O[C@@H]([C@@H](O)[C@H](O)[C@H]1O)C(O)=O | ||
Standard InChI: InChI=1S/C6H10O7/c7-1-2(8)4(5(10)11)13-6(12)3(1)9/h1-4,6-9,12H,(H,10,11)/t1-,2-,3+,4-,6+/m0/s1 | ||
HET Code: BDP | PubChem: 441478 | |
DrugBank: DB03156 | ChEMBL: CHEMBL1159524 | |
Molecular Formula: C6H10O7 | Mol. Weight: 194.04265 | logP: -3.1291 |
HBD: 5 | HBA: 6 | |
#Rotatable Bonds: 1 | TPSA: 127.45 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Acyl Substitution | SER 267 | A | 36.37 | - | Carboxylic Acid |
Binding Affinity |
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