PDB Entry (5jov)
PDB ID: 5jov Resolution: 1.5 Å Exp. Method: X-RAY DIFFRACTION
PMID: 27466444 DOI: 10.1098/rsob.160142
Protein
Protein Name: Alpha-xylosidase BoGH31A
Uniprot ID/ACC: A7LXT0 (GH31A_BACO1) Organism: Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC 11153)
Gene Symbol: BACOVA_02646 Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   5-fluoro-alpha-L-idopyranose
Canonical SMILES:   OC[C@@]1(F)[C@@H](O)[C@H](O)[C@@H](O)[C@@H](O1)O
Standard InChI:   InChI=1S/C6H11FO6/c7-6(1-8)4(11)2(9)3(10)5(12)13-6/h2-5,8-12H,1H2/t2-,3-,4+,5-,6+/m1/s1
HET Code:   B9D PubChem:   44241502
DrugBank:   - ChEMBL:   -
Molecular Formula:   C6H11FO6 Mol. Weight:   198.05397 logP:   -2.9242
HBD:   5 HBA:   6
#Rotatable Bonds:   1 TPSA:   110.38
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Acyl Substitution ASP 553 A 19.0 8.66 Hemiacetal
Binding Affinity
-