PDB Entry (3e16) |
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PDB ID: 3e16 | Resolution: 1.6 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 18752942 | DOI: 10.1016/j.bmcl.2008.08.029 | |
Protein |
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Protein Name: Prostasin | |
Uniprot ID/ACC: Q16651 (PRSS8_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: PRSS8 | Gene ID: 5652 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: benzyl N-[(1S)-5-amino-1-{[(1S)-1-{[(2S)-6-amino-1-(1,3-benzoxazol-2-yl)-1-oxohexan-2-yl]carbamoyl}-3-phenylpropyl]carbamoyl}pentyl]carbamate | ||
Canonical SMILES: NCCCC[C@H](NC(=O)OCc1ccccc1)C(=O)N[C@@H](CCc1ccccc1)C(=O)N[C@@H](CCCCN)C(=O)c1nc2ccccc2o1 | ||
Standard InChI: InChI=1S/C37H46N6O6/c38-23-11-9-18-29(33(44)36-42-28-17-7-8-20-32(28)49-36)40-35(46)31(22-21-26-13-3-1-4-14-26)41-34(45)30(19-10-12-24-39)43-37(47)48-25-27-15-5-2-6-16-27/h1-8,13-17,20,29-31H,9-12,18-19,21-25,38-39H2,(H,40,46)(H,41,45)(H,43,47)/t29-,30-,31-/m0/s1 | ||
HET Code: B4C | PubChem: 44563623 | |
DrugBank: - | ChEMBL: CHEMBL504394 | |
Molecular Formula: C37H46N6O6 | Mol. Weight: 670.3479 | logP: 4.1659 |
HBD: 5 | HBA: 9 | |
#Rotatable Bonds: 20 | TPSA: 191.67 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Hemi(thio)acetalization | SER 195 | B | 16.36 | - | Ketone |
Binding Affinity |
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Database Name | Value |
PDBBind | Ki : 5780 nM |