PDB Entry (1p03)
PDB ID: 1p03 Resolution: 2.15 Å Exp. Method: X-RAY DIFFRACTION
PMID: 2611204 DOI: 10.1021/bi00445a015
Protein
Protein Name: Alpha-lytic protease
Uniprot ID/ACC: P00778 (PRLA_LYSEN) Organism: Lysobacter enzymogenes
Gene Symbol: alphaLP Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   METHOXYSUCCINYL-ALA-ALA-PRO-VALINE BORONIC ACID
Canonical SMILES:   COC(=O)CCC(=O)N[C@@H](C)C(=O)N[C@@H](C)C(=O)N1CCC[C@H]1C(=O)N[C@H](B(O)O)C(C)C
Standard InChI:   InChI=1S/C20H35BN4O8/c1-11(2)17(21(31)32)24-19(29)14-7-6-10-25(14)20(30)13(4)23-18(28)12(3)22-15(26)8-9-16(27)33-5/h11-14,17,31-32H,6-10H2,1-5H3,(H,22,26)(H,23,28)(H,24,29)/t12-,13-,14-,17-/m0/s1
HET Code:   B2V PubChem:   10344639
DrugBank:   - ChEMBL:   -
Molecular Formula:   C20H35BN4O8 Mol. Weight:   470.2548 logP:   -1.9072
HBD:   5 HBA:   8
#Rotatable Bonds:   11 TPSA:   174.37
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Borylation SER 195 A 11.65 - Boronic Acid
Binding Affinity
-