PDB Entry (3fnm) |
||
| ||
PDB ID: 3fnm | Resolution: 1.7 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 19256527 | DOI: 10.1021/bi8014955 | |
Protein |
|
Protein Name: Gamma-glutamyltranspeptidase (Ggt) | |
Uniprot ID/ACC: O25743 (O25743_HELPY) | Organism: Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori) |
Gene Symbol: HP_1118 | Gene ID: - |
Protein Class: TRANSFERASE |
Ligand |
||
Ligand Name: ACIVICIN | ||
Canonical SMILES: N[C@@H]([C@@H]1CC(Cl)=NO1)C(O)=O | ||
Standard InChI: InChI=1S/C5H7ClN2O3/c6-3-1-2(11-8-3)4(7)5(9)10/h2,4H,1,7H2,(H,9,10)/t2-,4-/m0/s1 | ||
HET Code: AVN | PubChem: 294641 | |
DrugBank: - | ChEMBL: CHEMBL1231101 | |
Molecular Formula: C5H7ClN2O3 | Mol. Weight: 178.01453 | logP: -0.2605 |
HBD: 2 | HBA: 4 | |
#Rotatable Bonds: 2 | TPSA: 84.91 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Aliphatic Subsititution | THR 380 | B | 6.88 | - | Imidoyl Halide |
Binding Affinity |
|
Database Name | Value |
PDBBind | Ki : 19700 nM |