PDB Entry (4hg3) |
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PDB ID: 4hg3 | Resolution: 1.93 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 23897470 | DOI: 10.1107/S0907444913009347 | |
Protein |
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Protein Name: Deaminated glutathione amidase | |
Uniprot ID/ACC: P47016 (NIT2_YEAST) | Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) |
Gene Symbol: NIT2 | Gene ID: 853316 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: alpha-ketoglutarate | ||
Canonical SMILES: OC(=O)CCC(=O)C(O)=O | ||
Standard InChI: InChI=1S/C5H6O5/c6-3(5(9)10)1-2-4(7)8/h1-2H2,(H,7,8)(H,9,10) | ||
HET Code: AKG | PubChem: 51 | |
DrugBank: DB08845 | ChEMBL: CHEMBL1686 | |
Molecular Formula: C5H6O5 | Mol. Weight: 146.02153 | logP: -0.4951 |
HBD: 2 | HBA: 3 | |
#Rotatable Bonds: 4 | TPSA: 91.67 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Hemi(thio)acetalization | CYS 169 | D | 9.18 | - | Ketone |
Binding Affinity |
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