PDB Entry (4hg3)
PDB ID: 4hg3 Resolution: 1.93 Å Exp. Method: X-RAY DIFFRACTION
PMID: 23897470 DOI: 10.1107/S0907444913009347
Protein
Protein Name: Deaminated glutathione amidase
Uniprot ID/ACC: P47016 (NIT2_YEAST) Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Gene Symbol: NIT2 Gene ID: 853316
Protein Class: HYDROLASE
Ligand
Ligand Name:   alpha-ketoglutarate
Canonical SMILES:   OC(=O)CCC(=O)C(O)=O
Standard InChI:   InChI=1S/C5H6O5/c6-3(5(9)10)1-2-4(7)8/h1-2H2,(H,7,8)(H,9,10)
HET Code:   AKG PubChem:   51
DrugBank:   DB08845 ChEMBL:   CHEMBL1686
Molecular Formula:   C5H6O5 Mol. Weight:   146.02153 logP:   -0.4951
HBD:   2 HBA:   3
#Rotatable Bonds:   4 TPSA:   91.67
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Hemi(thio)acetalization CYS 169 D 9.18 - Ketone
Binding Affinity
-