PDB Entry (5tw8)
PDB ID: 5tw8 Resolution: 1.72 Å Exp. Method: X-RAY DIFFRACTION
PMID: 30366985 DOI: 10.1074/jbc.RA118.004952
Protein
Protein Name: Penicillin-binding protein 4
Uniprot ID/ACC: A0A0H2WY27 (A0A0H2WY27_STAAC) Organism: Staphylococcus aureus (strain COL)
Gene Symbol: pbp4 Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   Ceftaroline
Canonical SMILES:   CCO\N=C(/C(=O)N[C@H]1[C@H]2SCC(Sc3nc(cs3)-c3cc[n+](C)cc3)=C(N2C1=O)C(O)=O)c1nsc(N)n1
Standard InChI:   InChI=1S/C22H20N8O5S4/c1-3-35-27-13(16-26-21(23)39-28-16)17(31)25-14-18(32)30-15(20(33)34)12(9-36-19(14)30)38-22-24-11(8-37-22)10-4-6-29(2)7-5-10/h4-8,14,19H,3,9H2,1-2H3,(H3-,23,25,26,28,31,33,34)/p+1/b27-13-/t14-,19-/m1/s1
HET Code:   AI8 PubChem:   10031560
DrugBank:   - ChEMBL:   -
Molecular Formula:   C22H21N8O5S4+ Mol. Weight:   605.0512 logP:   1.2973
HBD:   3 HBA:   13
#Rotatable Bonds:   9 TPSA:   176.87
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Beta-Lactam Addition SER 75 A 21.59 - Beta-Lactam
Binding Affinity
-