PDB Entry (5osm)
PDB ID: 5osm Resolution: 1.77 Å Exp. Method: X-RAY DIFFRACTION
PMID: 29480525 DOI: 10.1002/anie.201711825
Protein
Protein Name: Cyclin-dependent kinase 2
Uniprot ID/ACC: P24941 (CDK2_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: CDK2 Gene ID: 1017
Protein Class: TRANSFERASE
Ligand
Ligand Name:   methyl 1-(prop-2-enoyl)-1,2,3,4-tetrahydroquinoline-6-carboxylate
Canonical SMILES:   COC(=O)c(c1)ccc(c12)N(CCC2)C(=O)C=C
Standard InChI:   InChI=1S/C14H15NO3/c1-3-13(16)15-8-4-5-10-9-11(14(17)18-2)6-7-12(10)15/h3,6-7,9H,1,4-5,8H2,2H3
HET Code:   AEQ PubChem:   51346078
DrugBank:   - ChEMBL:   -
Molecular Formula:   C14H15NO3 Mol. Weight:   245.1052 logP:   1.9384
HBD:   0 HBA:   3
#Rotatable Bonds:   2 TPSA:   46.61
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 80 A 26.06 13.38 Vinyl Carbonyl
Binding Affinity
-