PDB Entry (6q7n)
PDB ID: 6q7n Resolution: 2.02 Å Exp. Method: X-RAY DIFFRACTION
PMID: 31132786 DOI: 10.1038/s41586-019-1262-8
Protein
Protein Name: Glyceraldehyde 3-phosphate phosphatase
Uniprot ID/ACC: O58216 (O58216_PYRHO) Organism: Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Gene Symbol: PH0459 Gene ID: 1444353
Protein Class: HYDROLASE
Ligand
Ligand Name:   2-bromoacetophenone
Canonical SMILES:   BrCC(=O)c1ccccc1
Standard InChI:   InChI=1S/C8H7BrO/c9-6-8(10)7-4-2-1-3-5-7/h1-5H,6H2
HET Code:   AC0 PubChem:   6259
DrugBank:   - ChEMBL:   CHEMBL102953
Molecular Formula:   C8H7BrO Mol. Weight:   197.96803 logP:   2.2642
HBD:   0 HBA:   1
#Rotatable Bonds:   2 TPSA:   17.07
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Aliphatic Subsititution HIS 23 A 55.7 3.67 Halomethyl Carbonyl
Binding Affinity
-