PDB Entry (6q7n) |
||
| ||
PDB ID: 6q7n | Resolution: 2.02 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 31132786 | DOI: 10.1038/s41586-019-1262-8 | |
Protein |
|
Protein Name: Glyceraldehyde 3-phosphate phosphatase | |
Uniprot ID/ACC: O58216 (O58216_PYRHO) | Organism: Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) |
Gene Symbol: PH0459 | Gene ID: 1444353 |
Protein Class: HYDROLASE |
Ligand |
||
Ligand Name: 2-bromoacetophenone | ||
Canonical SMILES: BrCC(=O)c1ccccc1 | ||
Standard InChI: InChI=1S/C8H7BrO/c9-6-8(10)7-4-2-1-3-5-7/h1-5H,6H2 | ||
HET Code: AC0 | PubChem: 6259 | |
DrugBank: - | ChEMBL: CHEMBL102953 | |
Molecular Formula: C8H7BrO | Mol. Weight: 197.96803 | logP: 2.2642 |
HBD: 0 | HBA: 1 | |
#Rotatable Bonds: 2 | TPSA: 17.07 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Aliphatic Subsititution | HIS 23 | A | 55.7 | 3.67 | Halomethyl Carbonyl |
Binding Affinity |
||
- |