PDB Entry (5wae) |
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PDB ID: 5wae | Resolution: 1.8 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 29144724 | DOI: 10.1021/acsinfecdis.7b00152 | |
Protein |
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Protein Name: Beta-lactamase | |
Uniprot ID/ACC: Q6DRA1 (Q6DRA1_ACIBA) | Organism: Acinetobacter baumannii |
Gene Symbol: - | Gene ID: - |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: 3-(5,7,7-trihydroxy-2,2,7-trioxo-6-oxa-2lambda~6~-thia-3-aza-7lambda~5~-phospha-5-boraheptan-1-yl)benzoic acid | ||
Canonical SMILES: OB(CNS(=O)(=O)Cc1cccc(c1)C(O)=O)OP(O)(O)=O | ||
Standard InChI: InChI=1S/C9H13BNO9PS/c12-9(13)8-3-1-2-7(4-8)5-22(18,19)11-6-10(14)20-21(15,16)17/h1-4,11,14H,5-6H2,(H,12,13)(H2,15,16,17) | ||
HET Code: A1J | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C9H13BNO9PS | Mol. Weight: 353.01416 | logP: -1.0668 |
HBD: 5 | HBA: 6 | |
#Rotatable Bonds: 8 | TPSA: 170.46 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Borylation | SER 64 | A | 16.55 | - | Boronic Acid |
Binding Affinity |
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Database Name | Value |
PDBBind | Ki : 160 nM |