PDB Entry (5wae)
PDB ID: 5wae Resolution: 1.8 Å Exp. Method: X-RAY DIFFRACTION
PMID: 29144724 DOI: 10.1021/acsinfecdis.7b00152
Protein
Protein Name: Beta-lactamase
Uniprot ID/ACC: Q6DRA1 (Q6DRA1_ACIBA) Organism: Acinetobacter baumannii
Gene Symbol: - Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   3-(5,7,7-trihydroxy-2,2,7-trioxo-6-oxa-2lambda~6~-thia-3-aza-7lambda~5~-phospha-5-boraheptan-1-yl)benzoic acid
Canonical SMILES:   OB(CNS(=O)(=O)Cc1cccc(c1)C(O)=O)OP(O)(O)=O
Standard InChI:   InChI=1S/C9H13BNO9PS/c12-9(13)8-3-1-2-7(4-8)5-22(18,19)11-6-10(14)20-21(15,16)17/h1-4,11,14H,5-6H2,(H,12,13)(H2,15,16,17)
HET Code:   A1J PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C9H13BNO9PS Mol. Weight:   353.01416 logP:   -1.0668
HBD:   5 HBA:   6
#Rotatable Bonds:   8 TPSA:   170.46
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Borylation SER 64 A 16.55 - Boronic Acid
Binding Affinity
Database Name Value
PDBBind Ki : 160 nM