PDB Entry (5waf) |
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PDB ID: 5waf | Resolution: 2.03 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 29144724 | DOI: 10.1021/acsinfecdis.7b00152 | |
Protein |
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Protein Name: Beta-lactamase | |
Uniprot ID/ACC: Q6DRA1 (Q6DRA1_ACIBA) | Organism: Acinetobacter baumannii |
Gene Symbol: - | Gene ID: - |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: phosphonooxy-[[[4-(1~{H}-1,2,3,4-tetrazol-5-yl)-2-(trifluoromethyl)phenyl]sulfonylamino]methyl]borinic acid | ||
Canonical SMILES: OB(CNS(=O)(=O)c1ccc(cc1C(F)(F)F)-c1nnn[nH]1)OP(O)(O)=O | ||
Standard InChI: InChI=1S/C9H10BF3N5O7PS/c11-9(12,13)6-3-5(8-15-17-18-16-8)1-2-7(6)27(23,24)14-4-10(19)25-26(20,21)22/h1-3,14,19H,4H2,(H2,20,21,22)(H,15,16,17,18) | ||
HET Code: A0Y | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C9H10BF3N5O7PS | Mol. Weight: 431.00836 | logP: -0.7072 |
HBD: 5 | HBA: 8 | |
#Rotatable Bonds: 7 | TPSA: 187.62 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Borylation | SER 64 | A | 16.19 | - | Boronic Acid |
Binding Affinity |
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Database Name | Value |
PDBBind | Ki : 0.45 nM |