PDB Entry (5oo3) |
||
| ||
PDB ID: 5oo3 | Resolution: 1.73 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: - | |
Protein |
|
Protein Name: Cyclin-dependent kinase 2 | |
Uniprot ID/ACC: P24941 (CDK2_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: CDK2 | Gene ID: 1017 |
Protein Class: TRANSFERASE |
Ligand |
||
Ligand Name: 1-(4-ethyl-1,2,3,4-tetrahydroquinoxalin-1-yl)prop-2-en-1-one | ||
Canonical SMILES: c1cccc(c12)N(C(=O)C=C)CCN2CC | ||
Standard InChI: InChI=1S/C13H16N2O/c1-3-13(16)15-10-9-14(4-2)11-7-5-6-8-12(11)15/h3,5-8H,1,4,9-10H2,2H3 | ||
HET Code: 9ZB | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C13H16N2O | Mol. Weight: 216.12627 | logP: 2.0455 |
HBD: 0 | HBA: 2 | |
#Rotatable Bonds: 2 | TPSA: 23.55 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Michael Addition | CYS 80 | A | 24.61 | 13.16 | Vinyl Carbonyl |
Binding Affinity |
||
- |