PDB Entry (5oo1)
PDB ID: 5oo1 Resolution: 2.0 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Cyclin-dependent kinase 2
Uniprot ID/ACC: P24941 (CDK2_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: CDK2 Gene ID: 1017
Protein Class: TRANSFERASE
Ligand
Ligand Name:   N-[4-(pyrimidin-2-yl)phenyl]prop-2-enamide
Canonical SMILES:   C=CC(=O)Nc1ccc(cc1)-c2ncccn2
Standard InChI:   InChI=1S/C13H11N3O/c1-2-12(17)16-11-6-4-10(5-7-11)13-14-8-3-9-15-13/h2-9H,1H2,(H,16,17)
HET Code:   9Z2 PubChem:   134274818
DrugBank:   - ChEMBL:   -
Molecular Formula:   C13H11N3O Mol. Weight:   225.09021 logP:   2.2681
HBD:   1 HBA:   3
#Rotatable Bonds:   3 TPSA:   54.88
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 80 A 26.3 12.95 Vinyl Carbonyl
Binding Affinity
-