PDB Entry (5oo0)
PDB ID: 5oo0 Resolution: 1.6 Å Exp. Method: X-RAY DIFFRACTION
PMID: 29480525 DOI: 10.1002/anie.201711825
Protein
Protein Name: Cyclin-dependent kinase 2
Uniprot ID/ACC: P24941 (CDK2_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: CDK2 Gene ID: 1017
Protein Class: TRANSFERASE
Ligand
Ligand Name:   methyl 4-(prop-2-enoyl)-1,2,3,4-tetrahydroquinoxaline-1-carboxylate
Canonical SMILES:   c1cccc(c12)N(C(=O)C=C)CCN2C(=O)OC
Standard InChI:   InChI=1S/C13H14N2O3/c1-3-12(16)14-8-9-15(13(17)18-2)11-7-5-4-6-10(11)14/h3-7H,1,8-9H2,2H3
HET Code:   9YZ PubChem:   155564804
DrugBank:   - ChEMBL:   CHEMBL4578788
Molecular Formula:   C13H14N2O3 Mol. Weight:   246.10045 logP:   1.792
HBD:   0 HBA:   3
#Rotatable Bonds:   1 TPSA:   49.85
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 177 A 30.74 9.97 Vinyl Carbonyl
Binding Affinity
-