PDB Entry (5oo0) |
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PDB ID: 5oo0 | Resolution: 1.6 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 29480525 | DOI: 10.1002/anie.201711825 | |
Protein |
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Protein Name: Cyclin-dependent kinase 2 | |
Uniprot ID/ACC: P24941 (CDK2_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: CDK2 | Gene ID: 1017 |
Protein Class: TRANSFERASE |
Ligand |
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Ligand Name: methyl 4-(prop-2-enoyl)-1,2,3,4-tetrahydroquinoxaline-1-carboxylate | ||
Canonical SMILES: c1cccc(c12)N(C(=O)C=C)CCN2C(=O)OC | ||
Standard InChI: InChI=1S/C13H14N2O3/c1-3-12(16)14-8-9-15(13(17)18-2)11-7-5-4-6-10(11)14/h3-7H,1,8-9H2,2H3 | ||
HET Code: 9YZ | PubChem: 155564804 | |
DrugBank: - | ChEMBL: CHEMBL4578788 | |
Molecular Formula: C13H14N2O3 | Mol. Weight: 246.10045 | logP: 1.792 |
HBD: 0 | HBA: 3 | |
#Rotatable Bonds: 1 | TPSA: 49.85 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Michael Addition | CYS 177 | A | 30.74 | 9.97 | Vinyl Carbonyl |
Binding Affinity |
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