PDB Entry (5w2y)
PDB ID: 5w2y Resolution: 2.39 Å Exp. Method: X-RAY DIFFRACTION
PMID: 29397718 DOI: 10.1021/acs.jmedchem.7b01467
Protein
Protein Name: Neuraminidase
Uniprot ID/ACC: P03472 (NRAM_I75A5) Organism: Influenza A virus (strain A/Tern/Australia/G70C/1975 H11N9)
Gene Symbol: - Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   9-DEOXY-2,3-DIFLUORO-N-ACETYLNEURAMINIC ACID
Canonical SMILES:   C[C@@H](O)[C@@H](O)[C@@H]1O[C@@](F)([C@H](F)C(=O)[C@H]1NC(C)=O)C(O)=O
Standard InChI:   InChI=1S/C11H15F2NO7/c1-3(15)6(17)8-5(14-4(2)16)7(18)9(12)11(13,21-8)10(19)20/h3,5-6,8-9,15,17H,1-2H3,(H,14,16)(H,19,20)/t3-,5-,6-,8-,9-,11+/m1/s1
HET Code:   9T1 PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C11H15F2NO7 Mol. Weight:   311.08167 logP:   -1.7108
HBD:   4 HBA:   6
#Rotatable Bonds:   4 TPSA:   133.16
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Aliphatic Subsititution TYR 405 A 15.1 20.11 Alkyl Halide
Binding Affinity
-