PDB Entry (5w2u)
PDB ID: 5w2u Resolution: 2.0 Å Exp. Method: X-RAY DIFFRACTION
PMID: 29397718 DOI: 10.1021/acs.jmedchem.7b01467
Protein
Protein Name: Neuraminidase
Uniprot ID/ACC: P03472 (NRAM_I75A5) Organism: Influenza A virus (strain A/Tern/Australia/G70C/1975 H11N9)
Gene Symbol: - Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   7-DEOXYGENATED 2,3-DIFLUORO-N-ACETYLNEURAMINIC ACID
Canonical SMILES:   CC(=O)N[C@@H]1[C@@H](O)[C@@H](F)[C@@](F)(O[C@H]1C[C@H](O)CO)C(O)=O
Standard InChI:   InChI=1S/C11H17F2NO7/c1-4(16)14-7-6(2-5(17)3-15)21-11(13,10(19)20)9(12)8(7)18/h5-9,15,17-18H,2-3H2,1H3,(H,14,16)(H,19,20)/t5-,6-,7-,8+,9+,11+/m0/s1
HET Code:   9SJ PubChem:   132275069
DrugBank:   - ChEMBL:   CHEMBL4127125
Molecular Formula:   C11H17F2NO7 Mol. Weight:   313.09732 logP:   -1.9174
HBD:   5 HBA:   6
#Rotatable Bonds:   5 TPSA:   136.32
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Aliphatic Subsititution TYR 405 A 14.55 20.3 Alkyl Halide
Binding Affinity
-