PDB Entry (5zht) |
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PDB ID: 5zht | Resolution: 1.53 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 30391752 | DOI: 10.1016/j.molp.2018.10.006 | |
Protein |
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Protein Name: Strigolactone esterase D14 | |
Uniprot ID/ACC: Q10QA5 (D14_ORYSJ) | Organism: Oryza sativa subsp. japonica (Rice) |
Gene Symbol: D14 | Gene ID: 4331983 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: KK073 | ||
Canonical SMILES: FC(F)(F)c1ccc(cc1)N2CCN(CC2)C(=O)n3ccnn3 | ||
Standard InChI: InChI=1S/C14H14F3N5O/c15-14(16,17)11-1-3-12(4-2-11)20-7-9-21(10-8-20)13(23)22-6-5-18-19-22/h1-6H,7-10H2 | ||
HET Code: 9GU | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C14H14F3N5O | Mol. Weight: 325.11505 | logP: 2.0872 |
HBD: 0 | HBA: 5 | |
#Rotatable Bonds: 1 | TPSA: 54.26 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Acyl Substitution | SER 147 | A | 9.79 | - | Hydrazide |
Binding Affinity |
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