PDB Entry (5vnp)
PDB ID: 5vnp Resolution: 2.23 Å Exp. Method: X-RAY DIFFRACTION
PMID: 28557281 DOI: 10.1002/anie.201702417
Protein
Protein Name: Haloalkane dehalogenase
Uniprot ID/ACC: P0A3G2 (DHAA_RHORH) Organism: Rhodococcus rhodochrous
Gene Symbol: dhaA Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   N-(2-{2-[(6-chlorohexyl)oxy]ethoxy}ethyl)-2-[N-methyl-7-(methylamino)-2,1,3-benzoxadiazole-4-sulfonamido]acetamide
Canonical SMILES:   CNc1ccc(c(c12)non2)S(=O)(=O)N(C)CC(=O)NCCOCCOCCCCCCCl
Standard InChI:   InChI=1S/C20H32ClN5O6S/c1-22-16-7-8-17(20-19(16)24-32-25-20)33(28,29)26(2)15-18(27)23-10-12-31-14-13-30-11-6-4-3-5-9-21/h7-8,22H,3-6,9-15H2,1-2H3,(H,23,27)
HET Code:   9FM PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C20H32ClN5O6S Mol. Weight:   505.17618 logP:   1.8336
HBD:   2 HBA:   9
#Rotatable Bonds:   17 TPSA:   135.89
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Acyl Substitution ASP 105 A 11.43 9.34 Alkyl Halide
Binding Affinity
-