PDB Entry (5vfd) |
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PDB ID: 5vfd | Resolution: 1.93 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 28665414 | DOI: 10.1038/nmicrobiol.2017.104 | |
Protein |
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Protein Name: Beta-lactamase | |
Uniprot ID/ACC: Q8RLA6 (Q8RLA6_ACIBA) | Organism: Acinetobacter baumannii |
Gene Symbol: blaOXA33 | Gene ID: 58729229 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: ETX2514 | ||
Canonical SMILES: CC1=C[C@H]2CN([C@@H]1C(N)=O)C(=O)N2OS(O)(=O)=O | ||
Standard InChI: InChI=1S/C8H11N3O6S/c1-4-2-5-3-10(6(4)7(9)12)8(13)11(5)17-18(14,15)16/h2,5-6H,3H2,1H3,(H2,9,12)(H,14,15,16)/t5-,6-/m0/s1 | ||
HET Code: 9CP | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C8H11N3O6S | Mol. Weight: 277.03687 | logP: -1.3592 |
HBD: 2 | HBA: 5 | |
#Rotatable Bonds: 3 | TPSA: 130.24 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Imidazolidinone Opening | SER 81 | A | 28.98 | - | Imidazolidinone |
Binding Affinity |
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