PDB Entry (5vfd)
PDB ID: 5vfd Resolution: 1.93 Å Exp. Method: X-RAY DIFFRACTION
PMID: 28665414 DOI: 10.1038/nmicrobiol.2017.104
Protein
Protein Name: Beta-lactamase
Uniprot ID/ACC: Q8RLA6 (Q8RLA6_ACIBA) Organism: Acinetobacter baumannii
Gene Symbol: blaOXA33 Gene ID: 58729229
Protein Class: HYDROLASE
Ligand
Ligand Name:   ETX2514
Canonical SMILES:   CC1=C[C@H]2CN([C@@H]1C(N)=O)C(=O)N2OS(O)(=O)=O
Standard InChI:   InChI=1S/C8H11N3O6S/c1-4-2-5-3-10(6(4)7(9)12)8(13)11(5)17-18(14,15)16/h2,5-6H,3H2,1H3,(H2,9,12)(H,14,15,16)/t5-,6-/m0/s1
HET Code:   9CP PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C8H11N3O6S Mol. Weight:   277.03687 logP:   -1.3592
HBD:   2 HBA:   5
#Rotatable Bonds:   3 TPSA:   130.24
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Imidazolidinone Opening SER 81 A 28.98 - Imidazolidinone
Binding Affinity
-